Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g5265 ATGGACTCATCCTCTTCTTCACCCCCTACAAACACTAACAACACCTCCCTCGCTTTCTCTCTTTCCAATAATCACTTTCCTAATTCTTCACACTCTTCTTCCTCTCACCTCTCTCTTTTACACTCCTTCACCCCTTATCCTCCATCTCTCACCCTCACAGGAAGTAACGCCGTGGAGGCTTCACCGGAGGCACCAGACGGAGGAACCAGAAACCTCTCAATATTCACCGGCGGACACAAGTTCGAAGATTTTCTAGGAAACTCCGTCGTACCAACAAGAACCACCGCCGTATCGTGTGCACCTACACAGCTCCAGCAGTTTTCCACCGACAACGACATATATAATTCCGAGCTGAAGAAAACAATAGCTGCTTGCTTTCCTGGTGGCTACCCGGCCGAACCAAACTCCGAACCTCAGAAACCTCCCCCCAAGAAAACCGTCGATACCTTCGGCCAACGGACCTCCATCTACCGCGGTGTCACAAGACATAGATGGACTGGGAGATATGAAGCACATCTATGGGATAATAGCTGCAGGAGGGAAGGACAAAGTAGGAAAGGAAGACAAGTTTATTTGGGTGGCTATGACAAGGAAGAGAAAGCAGCTAGAGCTTATGATCTTGCTGCTCTCAAGTACTGGGGTCCAACCACCACCACCAACTTTCCAATTTCCAACTATGAGAAGGAGATTGATGACATGAAGAACATGACTAGACAAGAGTTTGTTGCTTCTCTACGAAGGAAGAGTAGTGGTTTCTCAAGAGGAGCATCAATTTACAGAGGAGTAACAAGACACCACCAGCATGGCCGATGGCAGGCAAGAATAGGCAGAGTTGCCGGAAACAAAGACCTCTACCTTGGCACTTTCAGCACTCAAGAAGAAGCTGCAGAAGCTTATGATATTGCAGCAATCAAATTTAGAGGACTAAATGCAGTAACAAATTTCGACATGAGTCGCTACGACGTTAAGAGCATTGCAAATAGTTCTCTTCCCATAGGAGGTTTATCAAACAAGAACAACAAAAACTCCACAGATTCTGTATCAGAAACCAAAATTCCCGAACCAATTCAATCCGATGAAATAGATCATCCATCTTCAACTTCGTCAGCAACAACCTTAAGCTTCGCCTTACCTATTAAGCAAGACACTTCTACCGATTATTGGTCCAATATTCTCGGCTTCCATAATAATAATAATCCTAGTGTTGTTACTACCACACCCTTCAACATGGATTTTTCTGCTCATGCACCTTCAAATACCAACAGTGATAATCATCACAATGCAGCATTTTTCAGTGGATCAGGAGGTATGTTTGTTCAGCAACAAAATATAAATGGAAGCAGTGGTTCTAATTCTTCATCTTCGTCTTCTTCAACGAGTTCAATTCCATTCGCAACGCCAATATTTTCTTTAAATAGTAATAATAATAGTAGTTATGAAAATGGTACTACTAGTTATGGAAATAACTGGATTGGACACACATTCCAAACACATGCAAAGCCAAGTCTGTTTCAAACACCAATATTTGGAATGGAATGA 1539 0.4321 MDSSSSSPPTNTNNTSLAFSLSNNHFPNSSHSSSSHLSLLHSFTPYPPSLTLTGSNAVEASPEAPDGGTRNLSIFTGGHKFEDFLGNSVVPTRTTAVSCAPTQLQQFSTDNDIYNSELKKTIAACFPGGYPAEPNSEPQKPPPKKTVDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQVYLGGYDKEEKAARAYDLAALKYWGPTTTTNFPISNYEKEIDDMKNMTRQEFVASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGLNAVTNFDMSRYDVKSIANSSLPIGGLSNKNNKNSTDSVSETKIPEPIQSDEIDHPSSTSSATTLSFALPIKQDTSTDYWSNILGFHNNNNPSVVTTTPFNMDFSAHAPSNTNSDNHHNAAFFSGSGGMFVQQQNINGSSGSNSSSSSSSTSSIPFATPIFSLNSNNNSSYENGTTSYGNNWIGHTFQTHAKPSLFQTPIFGME* 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g5265 512 MobiDBLite consensus disorder prediction 129 148 - -
Mal5g5265 512 MobiDBLite consensus disorder prediction 331 353 - -
Mal5g5265 512 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR BBM 23 463 - -
Mal5g5265 512 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 23 463 - -
Mal5g5265 512 MobiDBLite consensus disorder prediction 1 37 - -
Mal5g5265 512 SUPERFAMILY DNA-binding domain 155 224 IPR016177 GO:0003677
Mal5g5265 512 CDD AP2 155 224 IPR001471 GO:0003700|GO:0006355
Mal5g5265 512 Gene3D AP2/ERF domain 156 224 IPR036955 GO:0003700|GO:0006355
Mal5g5265 512 Gene3D AP2/ERF domain 258 318 IPR036955 GO:0003700|GO:0006355
Mal5g5265 512 SUPERFAMILY DNA-binding domain 257 318 IPR016177 GO:0003677
Mal5g5265 512 CDD AP2 257 318 IPR001471 GO:0003700|GO:0006355
Mal5g5265 512 ProSiteProfiles AP2/ERF domain profile. 156 222 IPR001471 GO:0003700|GO:0006355
Mal5g5265 512 MobiDBLite consensus disorder prediction 331 369 - -
Mal5g5265 512 Pfam AP2 domain 258 308 IPR001471 GO:0003700|GO:0006355
Mal5g5265 512 Pfam AP2 domain 156 214 IPR001471 GO:0003700|GO:0006355
Mal5g5265 512 ProSiteProfiles AP2/ERF domain profile. 258 316 IPR001471 GO:0003700|GO:0006355
Mal5g5265 512 PRINTS Ethylene responsive element binding protein signature 157 168 IPR001471 GO:0003700|GO:0006355
Mal5g5265 512 PRINTS Ethylene responsive element binding protein signature 298 318 IPR001471 GO:0003700|GO:0006355
Mal5g5265 512 SMART rav1_2 156 228 IPR001471 GO:0003700|GO:0006355
Mal5g5265 512 SMART rav1_2 258 322 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g5265 Mal-Chr5 126716129 126719846 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g5265 112 512 AP2-EREBP Transcription Factor Family AT5G57390 57.143 1.07e-148 431
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Mal5g5265 AP2 3.8e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g5265 K09285 - gmx:100803558 658.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g5265 5 126716129 126719846 Mal5g5265 5 126716129 126719846 ECH