Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g5261 ATGAGGTATATTCGGACAAACAGCTTCAAGAGACTCTTCTCATTCAAAAAATCTGGTTTAGGGGACAAACTTCTTAGTCCCAAAAGTGAAGAAAAAGATAAGAGCTTGAAGATTCTTCCATATGAAGAAGAACTTTGTCAAAGACCCACATGGAAATGTTTCTCTTATGAAGAGTTGTTTGATGCTACCAATGGCTTCATTTCAGAAAATATGGTTGGAAAAGGAGGGTATGCAGAGGTTTACAAGGGAAGACTGAAAAATGGTGAAGAAATTGCTGTGAAGAGATTAACAAGAACTTCAAAAGATGAAAGAAAAGAGAAAGAGTTTTTGACAGAGATTGGAACAATAGGTCATGTGCGTCATTTCAATGTGTTGTCTCTTCTAGGATGTTGTATTGACAATGGACTTTACTTTGTTTTTGAGCTATCCACCACTGGTTCTGTTTCTTCTATTCTTCATGATGAAAAGTTGGCACCTTTAGATTGGAAAACAAGACATAAAATAGTTCTTGGAACAGCGCGTGGACTTCATTACTTGCACAAAGGTTGCAAGAGGAGAATAATCCATAGAGATATCAAGGCTTCAAACATTTTATTGACAAAAGATTTTGAACCACAGATATCTGATTTTGGACTAGCAAAATGGCTTCCATCACAATGGACTCATCACTCAATTGCTCCAATTGAAGGGACATTTGGACATTTGGCACCAGAATACTACTTGCATGGAGTTGTGGATGAGAAAACAGATGTCTTTGCTTTTGGTGTGTTCTTGCTTGAAGTCATTTCTGGTAGGAAACCTGTGGATGTATCTCACCAAAGCTTGCATAGCTGGGCAAAACCAATTTTGAACAAGGGTGAGATAGAAGAGCTTGTAGATGCAAGGCTTGAGGGGGCTTATGATGTGACACAGTTAAAGAGACTTGCCTTTGCTGCCTCTCTATGCATCCGAGCATCTTCCACTTGGAGACCCACCATGACTGAGGTATTGGAGATAATGGAGGAGGGAGAGATGGATAAAGAAAAGTGGAAAATGCCAGAGGAAGAAGAAGAACAAGAGGAAGAGTTCTGGGGTTTTGAGGATCTGGAATATGAATACGACAGTTCCTTTTCAATGTCTTTGATTGATTCAATTGAAAGTAATTAA 1146 0.3883 MRYIRTNSFKRLFSFKKSGLGDKLLSPKSEEKDKSLKILPYEEELCQRPTWKCFSYEELFDATNGFISENMVGKGGYAEVYKGRLKNGEEIAVKRLTRTSKDERKEKEFLTEIGTIGHVRHFNVLSLLGCCIDNGLYFVFELSTTGSVSSILHDEKLAPLDWKTRHKIVLGTARGLHYLHKGCKRRIIHRDIKASNILLTKDFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYYLHGVVDEKTDVFAFGVFLLEVISGRKPVDVSHQSLHSWAKPILNKGEIEELVDARLEGAYDVTQLKRLAFAASLCIRASSTWRPTMTEVLEIMEEGEMDKEKWKMPEEEEEQEEEFWGFEDLEYEYDSSFSMSLIDSIESN* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g5261 381 ProSitePatterns Protein kinases ATP-binding region signature. 72 94 IPR017441 GO:0005524
Mal5g5261 381 SMART serkin_6 66 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g5261 381 Gene3D Phosphorylase Kinase; domain 1 38 141 - -
Mal5g5261 381 ProSitePatterns Serine/Threonine protein kinases active-site signature. 187 199 IPR008271 GO:0004672|GO:0006468
Mal5g5261 381 ProSiteProfiles Protein kinase domain profile. 66 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g5261 381 PANTHER OS08G0249100 PROTEIN 33 363 - -
Mal5g5261 381 PANTHER OS04G0654600 PROTEIN 33 363 - -
Mal5g5261 381 SUPERFAMILY Protein kinase-like (PK-like) 44 333 IPR011009 -
Mal5g5261 381 Gene3D Transferase(Phosphotransferase) domain 1 144 359 - -
Mal5g5261 381 Pfam Protein tyrosine and serine/threonine kinase 69 331 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g5261 Mal-Chr5 126653675 126657960 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g5261 54 338 Trihelix Transcription Factor Family AT1G70460 43.729 3.16e-71 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Mal5g5261 PK_Tyr_Ser-Thr 8.3e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g5261 - - gmx:100819499 629.787
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g5261 5 126653675 126657960 Mal5g5261 5 126653675 126657960 ECH