Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g5249 ATGAAGTTTTTAATCCAACAACCTAAAGTAACAAAAAAGTGTGACAGAAATATTTTAGCAAACATGTCATCATCATCATCATCATCCTCCTCAAAAGTAACATTGAAAAGTTGTTACTCCGTGAGACCAATGGAACCAACATGGTGTGGTCGTTTACCATTATCCGAATGGGATCAAATTGGAAACATAACACACGTTTCAACAATTTACTTTTACCGCCCCCCACAAAACTGGCTTACCTCCCCAACTAAAATAGCCACCACTTTGAAAGGCTCATTAAGCAAAGTCCTTGTGCCGTTTTATCCACTAGCGGGTCGTTTACAATGGAAAGAAAAAGGTCGTTTTGATCTTGAATGCAACTCATTGGGTGCTCAATTTATAGAAGCACAATCCTCGTTAACATTATCCGAACTAGGTGACTTTTCACCTTCTTCTGAATATTACCCTTACCTTATCCCGCATGTCGACTACACACTCCCAATTGAAGACATTCCATTGGTTATTGTTCAGCTCACAAGTTTCAAATGCGGTGGTGTTAGCATTTGTTTGTTAGTATCACATGCAGTTGCTGATGGACAGAGCGCGTTGCATTTCATTTCTGAGTGGGCTAGACTTGCACGTGGCGAGCCTTTGAAAACAATGCCATTTTTCGATACAAACGCATGGTTGTCAAATTCAAAATATTGTAATAATGCTAATGTTAATGAATGGGAGTTTAATGAACCTCCATTATTGTTAGGAAATTCGGATAATGTAGAAGAAAGGAAGAAAAAAACAACGGTGTCTATAATCAAAGTGAGTAAAACACAAGTTGAAAAGTTGAGAAAAACAGCGAATGAGAGTTGGGAAAAACCTAGTAATGGTCGAGGTTATACGAGGTATGAAACCTTAACCGGACATGTTTGGAGAAGTGCATCTAAAGCTAGAGGACATGAAAATGACCAACCAACTTCGCTTGGTGTTTGTGTTGATTGGAGGAAACGTGTGGAGCCTAATTTGCCAAAAGGGTATTTTGGGAATGGGACTTTTGATGTTGTGGCTACTAGTCTAGCAGGTGATTTAATGTCTAAGCCTTTAGGATATGCTTCAAGTAGGATAAGGGAGGCAATTGAGAAAGTGAATGATGAGTATGTGAGAATGGGGATTGAGTATTTTAAGAAGCAAGAGGATTTGATTAAATTTCAAGATCTTCATGCTAAGCTAGGGAGGGATGATCAAGGACCTTTTTATGGGAATCCTAATTTAGGAGTGGTTAGTTGGTTGACATTACCAATTTATGGACTTGATTTTGGATGGGGGAAAGAAGTTTATATGGGGCCAGGAACACATGATTCAGATGGAGATTCTTTGCTTCTTCCTGGTTATGATGATGATGGATCTTTGTTGGTTGCTATTTGTTTGCAAGAGGTTCATATGGATGCGTTTAAGAGGCATTTTTATCAAGATATTGTGTGA 1455 0.3869 MKFLIQQPKVTKKCDRNILANMSSSSSSSSSKVTLKSCYSVRPMEPTWCGRLPLSEWDQIGNITHVSTIYFYRPPQNWLTSPTKIATTLKGSLSKVLVPFYPLAGRLQWKEKGRFDLECNSLGAQFIEAQSSLTLSELGDFSPSSEYYPYLIPHVDYTLPIEDIPLVIVQLTSFKCGGVSICLLVSHAVADGQSALHFISEWARLARGEPLKTMPFFDTNAWLSNSKYCNNANVNEWEFNEPPLLLGNSDNVEERKKKTTVSIIKVSKTQVEKLRKTANESWEKPSNGRGYTRYETLTGHVWRSASKARGHENDQPTSLGVCVDWRKRVEPNLPKGYFGNGTFDVVATSLAGDLMSKPLGYASSRIREAIEKVNDEYVRMGIEYFKKQEDLIKFQDLHAKLGRDDQGPFYGNPNLGVVSWLTLPIYGLDFGWGKEVYMGPGTHDSDGDSLLLPGYDDDGSLLVAICLQEVHMDAFKRHFYQDIV* 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g5249 484 Pfam Transferase family 32 481 - -
Mal5g5249 484 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 35 483 - -
Mal5g5249 484 Gene3D - 248 482 IPR023213 -
Mal5g5249 484 Gene3D - 27 239 IPR023213 -
Mal5g5249 484 PANTHER SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE 35 483 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g5249 Mal-Chr5 126526414 126527868 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g5249 32 481 Monolignol Biosynthesis Gene Families AT5G48930 38.274 2.01e-102 311
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g5249 K13065 - gmx:100777007 625.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g5249 5 126526414 126527868 Mal5g5249 5 126526414 126527868 ECH