Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g5244 ATGTCTTCTACTGAGGAGAAGAGTAAGGGAGGCAAAAAGCTTCAGAAAAGCTACTTTGATGTGGTGGGTTTATGTTGTTCTTCAGAGGTACCTCTGATTGAGAACATCCTTAAACCTCTCCAAGGCATCAAAGAAGTTTCCGTCATCGTACCTTCACGGACAGTGATTGTTGTCCACGACACTCTTGTTATTTCCCAACTTCAAATTGTTAAGGCATTGAATCAAGCAAGACTAGAAGCAAATATAAGAGTGTATGGAGATGAAAAGCACAAAAAGACATGGCCAAGTATTTACTCAGTTGCTTCGGGTTTTCTACTATTGCTTTCATTTCTCAAATTTGTTTACCCTCCCTTCAAATTTCTTGCTCTTGCTGCTGTTGCTGCCGGCATCGTTCCGATCATCTTGAAAGCCATTGTTTCCATTAGGAATGTTAGAATTGACATTAACATTCTCGTCATTATAGCAGTGGTTGGGACCATTGCTATGAACGATTATTTGGAAGCAGGCACCATTGTTTTCCTCTTCTCAATTGCAGAATGGCTTGAGTCAAGGGCTAGCCACAAGGCAAATGCAGTGATGTCATCGTTGATGAGCATTGCTCCTCAAAAAGCAGTGGTAGCTGAAACAGGAGAGGTTGTGGATGTTGATGAGGTGAAAGTAAACACAATTATAGCAGTTAAAGCAGGGGAGATTATACCTATTGATGGAGTTGTTATAGATGGTGATTGTGAAGTTGATGAGAAGACATTGACAGGGGAATCATTCCCTGTAGCCAAACAAAAAGACTCTACTGTTTGGGCTGGCACAATCAACTTAAATGGTTATATTAGTGTGAAGACTACTGCATTAGCTGAAGATTGCGTGGTGGCTAAAATGGCAAAGCTTGTTGAAGAAGCTCAAAACAGCAAAACCAGCACTCAGAGATTGATTGACAAGTTTGCCAAGTTTTATACTCCAGCTGTTATAGTGATATCAACTCTTGTAGCAGTGGTTCCATTTGTGCTAAAAGTACATAACGAGAAATACTGGCTTCACTTTGCACTAGTTGTTTTAGTAAGTGCATGTCCATGTGCACTAATCCTTTCAACACCAGTTGCAACTTTCTGTGCTTATACCAAAGCAGCTACATCTGGTCTTCTTATCAAAGGGGGTCATTCTCTTGAAACACTGGCAAAAATTAAGGTCATGGCTTTTGACAAAACTGGTACCATAACAAAGGGTGAATTTGTGGTCACAAATTTTCAATCTCTTTCAGATGACATTGATATGAACACATTGCTTTACTGGGTGTCAAGCATTGAGAGCAAGTCAAGCCATCCATTGGCAGAAGCAATTGTTGATCATGGAAGGTCTCTCTCCATTGAACCAAAGCCAGAAAATGTGACAGAATTTGAAAATTTTCCCGGAGAAGGAATTTGTGGAAAAATTGATGAGAGAGTTCTCTACATTGGAAACAAAAAAATCGCCACAAGAGCAGGGTCTGAATCAGTAGTTCCAACCTTAGAAGGTGAAGTTCATGGAGGAAAGACCATTGGCTACATATACTCAGGACCAGCACCAGTTGGAATTTTCTCTCTATCCGATACTTGTCGGTCAGGGGTTCAGGAGGCAATAAGGAAGCTGAAGTTGATGGGAATCAAAACCGCTATGCTCACCGGAGATTGTCAGTCAGCTGCAATGCAAGCACAGGAGCAGTTAGGTCATGCCCTGGAGGTAGTCCATGCAGAACTTTTACCAGAGGGCAAGGTAAAAATCATCTCGGAATTTAAAAAGGAAGGTCCAACAGCGATGCTTGGAGATGGTTTAAATGACGCACCTGCATTGGCTTCAGCTGACATCGGGATCTCAATGGGTATTTCTGGTTCTGCACTGGCAAGTGAGACGGGCGATATAATTCTTATGTCGAACGACCTTAGGAAGGTACCTGAAGCCATTAAGCTTGCTAGAAAAGCTCGAAGGAAAGTGATACAAAATATTATACTGTCCGTCATTCCTAAGGTTGGGATTCTCGGTTTGGCCATTGGGGGTCATCCAATTGTTTGGGCAGCAGTTCTTGCAGATGTTGGCACATGTCTCTTGGTCATCTTAAACAGCATGTTACTTCTGAGAAATGGACACAAGCATGGAGGGAAAAGTTGTAAATCGTCAAATCAACATCATGTCCACAAAAATGGATGCGGTGACAGTAATGGCGGCTCCTCTCATCATCATCATCTTGATCGTCACCACCATCAGCATCAACATCAACATCATAGCCATAAGCATTGTTGCTCAGACAAGGTTCAGCCACAGAAGTGTGCCTCCCAGTCATGTTCTTCAAAGAAACCACCCTGCCCTTCAAATCCAAGTTTAAGTGGAAGTGTTAGCCATCTCAAACACAAGGAGAATCATGATCATCATAAGGGAAGTGATGAATTACATGAATCAGATCACAGTCATCATGGAAGATGTGACAAGAGTCAAGATGTCCCGAAGCATGATATTGAAAATAAGTGCTGTTCAGATTCACACAATGTGATTCTAACTGCTGATGATATTAGTGCAGCATCGGTAAACAGTCATGGAAATTGTATACGACATAAGTCCCATGGAACAAAACACTGCCACAACCAAAATATCATTATTGACATGGTTCCTCAGGATAGCACTTCAATTGGTTCTCCATGCCATCTCAATCCATGTGATAAAAAAGAAATCCAACAATTTCCTAAGCATTGCCACTCGAACCATGGTTGTGAAAATCTGCACGACCATGGAACCATTCATGACATTCAGCATCAGAAATCAGGTTGTCATTCTGATGTTAAGAAGCATGGGACAGATGAAATATCCATTGACATCATAACCGAGCACGTAGAATCAGCCTCGATGCACGGTTGTTCAAGTCTGGCAAAGAAAGAAAAAGATTCCTGTAAAGACTGCTCCAAAACATGTGAGAACTTGCCTGTTATGTTTGGTGGCTGTGAGGGTTCAAATGAGAAAGAAGTTAGTTCATGCTGCAAGAATGAGGGCTCTTCAAAGGAATCGACGGAATCGTCAATTGTGCATGCTTGTATTAGTTTGGACAAGAGAGTAGTTGGTGGATGTTGCAAGAGCTACATGAAGGAATGCTGTGGCAAGCATGGACATTCAGGGGCTGGTAGCTTTGTAGGTTTATCAGAAATTATCACAGAATAG 3177 0.4177 MSSTEEKSKGGKKLQKSYFDVVGLCCSSEVPLIENILKPLQGIKEVSVIVPSRTVIVVHDTLVISQLQIVKALNQARLEANIRVYGDEKHKKTWPSIYSVASGFLLLLSFLKFVYPPFKFLALAAVAAGIVPIILKAIVSIRNVRIDINILVIIAVVGTIAMNDYLEAGTIVFLFSIAEWLESRASHKANAVMSSLMSIAPQKAVVAETGEVVDVDEVKVNTIIAVKAGEIIPIDGVVIDGDCEVDEKTLTGESFPVAKQKDSTVWAGTINLNGYISVKTTALAEDCVVAKMAKLVEEAQNSKTSTQRLIDKFAKFYTPAVIVISTLVAVVPFVLKVHNEKYWLHFALVVLVSACPCALILSTPVATFCAYTKAATSGLLIKGGHSLETLAKIKVMAFDKTGTITKGEFVVTNFQSLSDDIDMNTLLYWVSSIESKSSHPLAEAIVDHGRSLSIEPKPENVTEFENFPGEGICGKIDERVLYIGNKKIATRAGSESVVPTLEGEVHGGKTIGYIYSGPAPVGIFSLSDTCRSGVQEAIRKLKLMGIKTAMLTGDCQSAAMQAQEQLGHALEVVHAELLPEGKVKIISEFKKEGPTAMLGDGLNDAPALASADIGISMGISGSALASETGDIILMSNDLRKVPEAIKLARKARRKVIQNIILSVIPKVGILGLAIGGHPIVWAAVLADVGTCLLVILNSMLLLRNGHKHGGKSCKSSNQHHVHKNGCGDSNGGSSHHHHLDRHHHQHQHQHHSHKHCCSDKVQPQKCASQSCSSKKPPCPSNPSLSGSVSHLKHKENHDHHKGSDELHESDHSHHGRCDKSQDVPKHDIENKCCSDSHNVILTADDISAASVNSHGNCIRHKSHGTKHCHNQNIIIDMVPQDSTSIGSPCHLNPCDKKEIQQFPKHCHSNHGCENLHDHGTIHDIQHQKSGCHSDVKKHGTDEISIDIITEHVESASMHGCSSLAKKEKDSCKDCSKTCENLPVMFGGCEGSNEKEVSSCCKNEGSSKESTESSIVHACISLDKRVVGGCCKSYMKECCGKHGHSGAGSFVGLSEIITE* 1059
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g5244 1058 SUPERFAMILY HAD-like 396 699 IPR036412 -
Mal5g5244 1058 TIGRFAM ATPase-IB2_Cd: cadmium-translocating P-type ATPase 148 489 - -
Mal5g5244 1058 Pfam haloacid dehalogenase-like hydrolase 393 612 - -
Mal5g5244 1058 PRINTS Copper-transporting ATPase signature 3 17 - -
Mal5g5244 1058 PRINTS Copper-transporting ATPase signature 188 206 - -
Mal5g5244 1058 PRINTS Copper-transporting ATPase signature 319 333 - -
Mal5g5244 1058 PRINTS Copper-transporting ATPase signature 633 647 - -
Mal5g5244 1058 PRINTS Copper-transporting ATPase signature 576 593 - -
Mal5g5244 1058 SFLD C1.7: P-type atpase like 380 650 - -
Mal5g5244 1058 PRINTS P-type cation-transporting ATPase superfamily signature 246 260 - -
Mal5g5244 1058 PRINTS P-type cation-transporting ATPase superfamily signature 522 533 - -
Mal5g5244 1058 PRINTS P-type cation-transporting ATPase superfamily signature 598 617 - -
Mal5g5244 1058 PRINTS P-type cation-transporting ATPase superfamily signature 544 554 - -
Mal5g5244 1058 PRINTS P-type cation-transporting ATPase superfamily signature 622 634 - -
Mal5g5244 1058 PRINTS P-type cation-transporting ATPase superfamily signature 397 411 - -
Mal5g5244 1058 ProSiteProfiles Heavy-metal-associated domain profile. 16 82 IPR006121 GO:0046872
Mal5g5244 1058 SUPERFAMILY Calcium ATPase, transmembrane domain M 149 391 IPR023298 -
Mal5g5244 1058 MobiDBLite consensus disorder prediction 707 756 - -
Mal5g5244 1058 SUPERFAMILY Calcium ATPase, transduction domain A 211 296 IPR008250 -
Mal5g5244 1058 Gene3D - 11 84 - -
Mal5g5244 1058 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 148 701 IPR027256 GO:0006812|GO:0016021|GO:0019829
Mal5g5244 1058 MobiDBLite consensus disorder prediction 772 789 - -
Mal5g5244 1058 Gene3D - 388 649 IPR023214 -
Mal5g5244 1058 PANTHER CADMIUM/ZINC-TRANSPORTING ATPASE HMA4-RELATED 4 774 - -
Mal5g5244 1058 Pfam E1-E2 ATPase 201 375 - -
Mal5g5244 1058 Gene3D - 408 530 IPR023299 GO:0000166
Mal5g5244 1058 MobiDBLite consensus disorder prediction 790 822 - -
Mal5g5244 1058 PANTHER CADMIUM/ZINC-TRANSPORTING ATPASE HMA2-RELATED 4 774 - -
Mal5g5244 1058 SUPERFAMILY HMA, heavy metal-associated domain 13 81 IPR036163 GO:0046872
Mal5g5244 1058 MobiDBLite consensus disorder prediction 736 755 - -
Mal5g5244 1058 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 171 676 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Mal5g5244 1058 ProSitePatterns E1-E2 ATPases phosphorylation site. 399 405 IPR018303 -
Mal5g5244 1058 MobiDBLite consensus disorder prediction 772 822 - -
Mal5g5244 1058 SFLD p-type atpase 380 650 IPR044492 -
Mal5g5244 1058 CDD P-type_ATPase_HM 97 700 - -
Mal5g5244 1058 Gene3D - 186 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g5244 Mal-Chr5 126436916 126445584 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g5244 12 829 Primary Pumps ATPases AT4G30110 63.273 0.0 1041
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g5244 K01534 - gmx:100817567 1335.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g5244 5 126436916 126445584 Mal5g5244 5 126436916 126445584 ECH