Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g5243 ATGGTCTGGTCGGATGATATCATCCAACAATTGGAAGCAACTAAGCAAATTCGGAAGCTTCTTAACATTGAAGAAGAAGTTATTCAATCTGGTGTTGTTCCTCGTTTGGTTGAATTTCTATTAAGGGACGATTTTCCTCAACTTCAGTATGAAGCTGCTTGGGCACTCACAAACATAGCAGCTGTAACTTGTGAGAGCACTAAGGTGGTAATTGATCATGGGGCAGTACCAATGTTTGTCAAGCTACTTAGTTCATCTAGTAATCGTATTCGGGAGCAGGCTGTGTGGGCATTGGGGAACGTTGCCGGTGATTCCCCTAGGTGCCGTGATCTTGTTCTCAGTCATGGTGCCATGATCCCGCTGTTATCCCAGTTGAATGAGCAAGCAAGGCGTTCTATGCTGAAAATTGCCACGTGGACCTTGTCAAACTTTTGCAGAGGCAAGCCAAAACCCCGATTTGAGCAGGTGAGGATAGCACTTCCCGCTCTCGAGCGTTTGGTTTTTTCCAATGATGAAGAAGTCCTGACAAATGCATGCTGGGCACTCTCAAATCTTTCTCATGGAACAAACGAGAAAATCCAAGCCGTGATTGAGACAGGTATATGTGGCAGATTGGTGCAGCTCCTTCAGCACCCATCTCCTTCAGTGTTGATTCCTGTAATTCACACGGTGGGAAATATTGCAACTGGAGACAATATGCAGACTCAGGCTATTATCAATCATGGACCACTCCCATACCTTTTGAGCCTGTTGATCAATAATCACAAGAATAGTATTAAGAGAAAAGCTTGTTGGGCTATATCAAAGATTACAGCTGGAAACAGAGAGACGATACAGGCTGTTATTGAAGCTGGTCTGATTGCTCCCCTAGTCAATCTTCTTCAAAATGACGAGTTTAAAATTAAAAAAGAAGCTGCATGGGCACTCTCTAATGCTACGATTTGCAGTACCCATGAACAAATCAAGTACTTAGTGAGCCATGGTTGCATTAAGCCTCTGTGTGATTTGCTTGTTTGCCCTGATCCAAGAATTGTTTATGTCTGCTTAAAAGGTCTTGAGAATTTTCTGAAGGTTGGAGAAGCGGAGAAAAGATTTTGTAACACGGGAGATGTCAACTTGTATGCTCAGATGATAGATGATGCTGAGGGATTGGAAAAGATTGAAAACTTGCAGAGTCATGACAACAAAAAAATTTATGAGAAGGTTGTTGAAATTCTCAAGACATATTGGTTGGAAGATGAAGATCAGACACTACCTCCAGGCCATGGTAGACAAGATCACGATCCGAAACGTAAGATTGTACGCTTATACGGTCTTTCCACCCCTTGGCATGCTCGTGTATGCCTGGAATCAGAGTTTGGCGCGCACAGTCGGATTCGCCGCAAAAAGTCGAGGGAGCGTTGGAATCGCGCGAATCTGCCGCCGATTCCATTATTGGGTTTCTCAGATATGTTTTCGCGGGTCGGGTCCGCTATTAAACGCTCCTTTTGGGATTTAAAACCCTAA 1506 0.4389 MVWSDDIIQQLEATKQIRKLLNIEEEVIQSGVVPRLVEFLLRDDFPQLQYEAAWALTNIAAVTCESTKVVIDHGAVPMFVKLLSSSSNRIREQAVWALGNVAGDSPRCRDLVLSHGAMIPLLSQLNEQARRSMLKIATWTLSNFCRGKPKPRFEQVRIALPALERLVFSNDEEVLTNACWALSNLSHGTNEKIQAVIETGICGRLVQLLQHPSPSVLIPVIHTVGNIATGDNMQTQAIINHGPLPYLLSLLINNHKNSIKRKACWAISKITAGNRETIQAVIEAGLIAPLVNLLQNDEFKIKKEAAWALSNATICSTHEQIKYLVSHGCIKPLCDLLVCPDPRIVYVCLKGLENFLKVGEAEKRFCNTGDVNLYAQMIDDAEGLEKIENLQSHDNKKIYEKVVEILKTYWLEDEDQTLPPGHGRQDHDPKRKIVRLYGLSTPWHARVCLESEFGAHSRIRRKKSRERWNRANLPPIPLLGFSDMFSRVGSAIKRSFWDLKP* 502
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mal5g5243 501 Pfam Atypical Arm repeat 372 418 IPR032413 -
Mal5g5243 501 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 31 74 IPR000225 GO:0005515
Mal5g5243 501 SUPERFAMILY ARM repeat 2 409 IPR016024 -
Mal5g5243 501 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 158 200 IPR000225 GO:0005515
Mal5g5243 501 Pfam Armadillo/beta-catenin-like repeat 105 146 IPR000225 GO:0005515
Mal5g5243 501 Pfam Armadillo/beta-catenin-like repeat 26 61 IPR000225 GO:0005515
Mal5g5243 501 Pfam Armadillo/beta-catenin-like repeat 318 354 IPR000225 GO:0005515
Mal5g5243 501 Pfam Armadillo/beta-catenin-like repeat 231 272 IPR000225 GO:0005515
Mal5g5243 501 Pfam Armadillo/beta-catenin-like repeat 159 186 IPR000225 GO:0005515
Mal5g5243 501 Pfam Armadillo/beta-catenin-like repeat 275 312 IPR000225 GO:0005515
Mal5g5243 501 Pfam Armadillo/beta-catenin-like repeat 190 228 IPR000225 GO:0005515
Mal5g5243 501 Pfam Armadillo/beta-catenin-like repeat 66 102 IPR000225 GO:0005515
Mal5g5243 501 PANTHER IMPORTIN SUBUNIT ALPHA 2 421 - -
Mal5g5243 501 PIRSF Importin_alpha 1 430 IPR024931 GO:0005737|GO:0006606|GO:0061608
Mal5g5243 501 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 74 116 IPR000225 GO:0005515
Mal5g5243 501 SMART arm_5 104 146 IPR000225 GO:0005515
Mal5g5243 501 SMART arm_5 19 61 IPR000225 GO:0005515
Mal5g5243 501 SMART arm_5 274 314 IPR000225 GO:0005515
Mal5g5243 501 SMART arm_5 63 103 IPR000225 GO:0005515
Mal5g5243 501 SMART arm_5 317 357 IPR000225 GO:0005515
Mal5g5243 501 SMART arm_5 189 229 IPR000225 GO:0005515
Mal5g5243 501 SMART arm_5 231 272 IPR000225 GO:0005515
Mal5g5243 501 SMART arm_5 148 187 IPR000225 GO:0005515
Mal5g5243 501 Gene3D - 1 411 IPR011989 -
Mal5g5243 501 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 285 313 IPR000225 GO:0005515
Mal5g5243 501 PANTHER IMPORTIN ALPHA 2 421 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Mal5g5243 Mal-Chr5 126430732 126434217 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g5243 46 309 U-box Gene Family AT3G46510 23.396 8.39e-07 49.7