Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g5230 ATGTCTTCGTGTTTTAGTGGCACAGGAGGAAGAACCTATGGGTTGGATTTAGATATAGTTAAATCACCACCATGTTCATGGAGTAGAACATCACAAACATCTTCTTCACCTTCTTCAACAATCTCCGAATCAAGCAATTCACCACTTGCAATCTACACCACAAAACCCAGAACCCCCAGAAAACGACCCAACCAAACCTACAACGAAGCTGCAACACTCCTTAACACCGCTTACCCAAACCTTTTCTCAAATCCAAACCCCAATAATAATAATAAATTCACCAAATCAGAAAAAGCTTATGAATTCCACTCTTCTGAACTTCTTTTACCTTTCAGAGTATTGAACACGTCATCATCTTTTTTACTTCACGGCAAGCCCAATTTCCCGTCGGAGCCAAAACCGGTGAAACCGTGTCAGAGTCCCGGAGAAATTAGTTCAATGGTGAACTGTCTTGAATTGAACGATGATGATGATTTCGATGCTGAATCGATACTCGACGAAGAAATTGAAGAGGGAATTGATAGTATCATGGGAGGTAGAATTCAAGAAGATGAAACTTCTTCTTCTCAGCATCCATGGATTGGTTTTGGCGGGAAATTCGATTTCCGGTTAGGGTTACAGAGAGCTGGAGTAAGAGCTCTTCGTCATGTCGATGAAGGTAATTGGTGGAATTTTCCGGCGGTTGATATGTTGAAAATTTCGCCCAAAATATGCAGTGTCGGTGGAAAACCGGCAGCGCCAGTGACGGAGAAGAAGAAAAAGAAGAAGGTTGTTGCGTTGGAGAAATTGAATGAGGAATTGAAAGAAACGGAATTGCCGAAGTCGAAAAGTGGATTGTTGTTGAAATTGAATTACGACGGTGTTAGGAAAGCTTGGTCTGACCGGGGAACACCGTTCGCCGACGATAGCCCTGTTTCAGATGCATCGGGAAATGACGTCAATGCACGGTTGTCACAAATTGATTTGTTGTGGGAGAATGGAGGAGGAAGTGGTGTAAGAGAAGCCAGCGTGCAGCGTTACAAAGAAAAGCGTCGTACACGCCTTTTCTCTAAGAAGATTAGATATCAAGTCAGAAAAGTCAATGCAGATCGACGGCCAAGAATGAAGGGCCGATTTGTTAGGAGGCTGAATGCTAGCTCAAATGCACACAAATGA 1155 0.4312 MSSCFSGTGGRTYGLDLDIVKSPPCSWSRTSQTSSSPSSTISESSNSPLAIYTTKPRTPRKRPNQTYNEAATLLNTAYPNLFSNPNPNNNNKFTKSEKAYEFHSSELLLPFRVLNTSSSFLLHGKPNFPSEPKPVKPCQSPGEISSMVNCLELNDDDDFDAESILDEEIEEGIDSIMGGRIQEDETSSSQHPWIGFGGKFDFRLGLQRAGVRALRHVDEGNWWNFPAVDMLKISPKICSVGGKPAAPVTEKKKKKKVVALEKLNEELKETELPKSKSGLLLKLNYDGVRKAWSDRGTPFADDSPVSDASGNDVNARLSQIDLLWENGGGSGVREASVQRYKEKRRTRLFSKKIRYQVRKVNADRRPRMKGRFVRRLNASSNAHK* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g5230 384 Coils Coil 250 270 - -
Mal5g5230 384 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 1 379 - -
Mal5g5230 384 PANTHER OS02G0148000 PROTEIN 1 379 - -
Mal5g5230 384 ProSiteProfiles CCT domain profile. 333 375 IPR010402 GO:0005515
Mal5g5230 384 MobiDBLite consensus disorder prediction 26 64 - -
Mal5g5230 384 Pfam CCT motif 333 374 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g5230 Mal-Chr5 126266949 126269829 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g5230 274 375 C2C2-CO-like Transcription Factor Family AT1G25440 44.828 1.27e-22 96.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mal5g5230 CCT 5.1e-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g5230 - - aprc:113845796 434.491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g5230 5 126266949 126269829 Mal5g5230 5 126266949 126269829 ECH