Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g5208 ATGCGAAGGAATGCATTTGGTTCCAACAATTACCCTCGAAAGAAAGGAGGAAGTTTTTTGATGTTTATCTGGGATGCTTGCAAGGATCTGACCTTGATTATTTTAATGGTAGCTGCCGTGGCTTCATTAGCACTGGGGATAAAATCTGAGGGTATTAAGGAAGGATGGTATGATGGAGGAAGCATTGCTTTTGCAGTTATTCTTGTTATTGCTGTTACAGCCATAACCGATTATAAGCAGTATCTTCAGTTTCAAGATTTAAATGAGCATAAAAGAAACATACATTTGCAGGTTATTAGAGATGGAAGAAGAGTTGAGATCTCCATAATTTAA 333 0.3724 MRRNAFGSNNYPRKKGGSFLMFIWDACKDLTLIILMVAAVASLALGIKSEGIKEGWYDGGSIAFAVILVIAVTAITDYKQYLQFQDLNEHKRNIHLQVIRDGRRVEISII* 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g5208 110 Pfam Cation transporter/ATPase, N-terminus 2 42 IPR004014 -
Mal5g5208 110 PANTHER CATION TRANSPORTING ATPASE 2 109 - -
Mal5g5208 110 Gene3D - 25 80 - -
Mal5g5208 110 Gene3D - 2 106 - -
Mal5g5208 110 SUPERFAMILY Calcium ATPase, transmembrane domain M 2 91 IPR023298 -
Mal5g5208 110 PANTHER CALCIUM-TRANSPORTING ATPASE 9, PLASMA MEMBRANE-TYPE 2 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g5208 Mal-Chr5 126011462 126013430 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g5208 2 109 Primary Pumps ATPases AT5G57110 80.556 1.47e-56 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g5208 K01537 - gmx:100813841 199.904