Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g5207 ATGAAGGTCACCATTGTAGTGGTTGCAGTGCCTGAAGGGCTTCCTTTAGCAGTTACCTTAACACTTGCTTACTCGATGAAAAAAATGATGGCAGATAAAGCTTTGGTGAGGAGGCTTTCTGCCTGTGAGACAATGGGATCAGCCACAACCATTTGCAGTGATAAGACTGGAACATTGACTATGAATCAGATGACTGTGGTTGAGGCATGTGTTGGGGGGAAGAAGATTGTTCCTCCTCGCGATAACTCACAGCTCTCTCCTATCCTCTACTCTTTGCTGATTGAAGGTGTTGCACAGAACACTACTGGAAGTGTTTTTGTACCTGAGAGCGGCAATGGCGTTGAGGTTTCTGGATCACCAACTAAAAAGGCCATTTTACATTGGGGATTTCAGCTTGGGATGGATTTTGAGGCTGCTAGATCAGAATCATCAATCATACATGTCTTTCCATTCAACTCAGACAAAAAAAGAGGCGGAGTAGCACTACAGACGATGACAGTTTTTGAAAAAGTTATTGAAGATATGGCTGCTGACAGTCTACGCTGCGTTGCCATTGCATATAGATTATTAGATGAAATGGAGAATATTCCAACCTGCGAAGAAGAACTTGCTCACTGGTCATTACCAGAGGATGATCTTGTTTTACTAGCTATTGTTGGTATGAAGGATCCTTGTCGACCTGGTGTCAAAGATGCAGTGCAACTTTGCCAAAAAGCTGGGGTTAAGGTAAAAATGGTCACTGGTGACAATGTTAAAACTGCAAAAGCAATTGCTATGGAATGTGGAATACTTGGTTCGTTTTCTGATGCTACAGAGCCAAACATCATTGAAGGAAAAACATTCCGAGTTATGGGACGGTCGTCTCCTAATGACAAGCTTTTGCTTGTGCAAGCATTGAGGAGGAAGGGACATGTTGTGGCTGTAACAGGGGATGGAACAAATGATGCTCCAGCACTACATGAGGCCGATATAGGTCTTGCAATGGGCATTCAAGGTACAGAAGTTGCTAAAGAGAGCTCTGATATCATTATTTTGGATGACAATTTTGCTTCTGTTGTGAAGGTTGTCAAATGGGGGAGATCTGTGTATGCAAATATTCAGAAATTTATCCAGTTTCAGCTTACAGTCAATGTAGCAGCTCTTGTTATAAATGTCATTGCTTCATTTTCCACTGGTGAAGTCCCACTAAATACAGTACAGCTTCTTTGGGTAAATCTAATCATGGATACTCTTGGAGCACTAGCCTTGGCAACTGAACCACCAACTGATCACCTAATGGATCAGCTTCCAGTGGGTAGAAGAGAACCTCTTGTAACAAATATTATGTGGAGGAATCTGCTGATACAGGTCTTTAATGAATTTAATGCAAGAAAGCTAGATGAATTCAACATTTTCAAGGGGGTTACCAGAAACTACCTATTTATGGTGATAGTGGGATTAACTATAGTACTCCAGATTGTCATCATTGAATTTCTTGGAAATTTCACTAAAACAGTCAAGCTTAATTGGAAGCAGTGGCTCATCTGTGTTATTATAGGACTTGTCAGCTGGCCTCTTGCCGTGGTTGGAAAACTGATACCAGTACCAGCAGTGACTCCCATGAATAACTGTTTTCGAAGATTTCGTCCAGGAAGAACAAAAAGAAAGATGGAGTCTGAAGCTTCTCACTAG 1671 0.4165 MKVTIVVVAVPEGLPLAVTLTLAYSMKKMMADKALVRRLSACETMGSATTICSDKTGTLTMNQMTVVEACVGGKKIVPPRDNSQLSPILYSLLIEGVAQNTTGSVFVPESGNGVEVSGSPTKKAILHWGFQLGMDFEAARSESSIIHVFPFNSDKKRGGVALQTMTVFEKVIEDMAADSLRCVAIAYRLLDEMENIPTCEEELAHWSLPEDDLVLLAIVGMKDPCRPGVKDAVQLCQKAGVKVKMVTGDNVKTAKAIAMECGILGSFSDATEPNIIEGKTFRVMGRSSPNDKLLLVQALRRKGHVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVKWGRSVYANIQKFIQFQLTVNVAALVINVIASFSTGEVPLNTVQLLWVNLIMDTLGALALATEPPTDHLMDQLPVGRREPLVTNIMWRNLLIQVFNEFNARKLDEFNIFKGVTRNYLFMVIVGLTIVLQIVIIEFLGNFTKTVKLNWKQWLICVIIGLVSWPLAVVGKLIPVPAVTPMNNCFRRFRPGRTKRKMESEASH* 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g5207 556 ProSitePatterns E1-E2 ATPases phosphorylation site. 54 60 IPR018303 -
Mal5g5207 556 PRINTS H+-transporting ATPase (proton pump) signature 309 325 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Mal5g5207 556 PRINTS H+-transporting ATPase (proton pump) signature 341 366 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Mal5g5207 556 PRINTS H+-transporting ATPase (proton pump) signature 168 186 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Mal5g5207 556 Gene3D - 449 530 - -
Mal5g5207 556 Gene3D - 225 354 IPR023214 -
Mal5g5207 556 PRINTS P-type cation-transporting ATPase superfamily signature 309 328 - -
Mal5g5207 556 PRINTS P-type cation-transporting ATPase superfamily signature 333 345 - -
Mal5g5207 556 PRINTS P-type cation-transporting ATPase superfamily signature 239 249 - -
Mal5g5207 556 PRINTS P-type cation-transporting ATPase superfamily signature 217 228 - -
Mal5g5207 556 PRINTS P-type cation-transporting ATPase superfamily signature 52 66 - -
Mal5g5207 556 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 3 76 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Mal5g5207 556 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 279 389 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Mal5g5207 556 Pfam haloacid dehalogenase-like hydrolase 49 323 - -
Mal5g5207 556 SUPERFAMILY Calcium ATPase, transmembrane domain M 3 528 IPR023298 -
Mal5g5207 556 Gene3D - 355 448 - -
Mal5g5207 556 SFLD Haloacid Dehalogenase 34 361 - -
Mal5g5207 556 SUPERFAMILY HAD-like 50 414 IPR036412 -
Mal5g5207 556 Gene3D - 1 77 - -
Mal5g5207 556 PANTHER CALCIUM-TRANSPORTING ATPASE 2 163 - -
Mal5g5207 556 PANTHER CALCIUM-TRANSPORTING ATPASE 449 541 - -
Mal5g5207 556 PANTHER CALCIUM-TRANSPORTING ATPASE 165 449 - -
Mal5g5207 556 PANTHER CATION TRANSPORTING ATPASE 2 163 - -
Mal5g5207 556 PANTHER CATION TRANSPORTING ATPASE 449 541 - -
Mal5g5207 556 PANTHER CATION TRANSPORTING ATPASE 165 449 - -
Mal5g5207 556 SFLD p-type atpase 34 361 IPR044492 -
Mal5g5207 556 Pfam Cation transporting ATPase, C-terminus 394 449 IPR006068 -
Mal5g5207 556 Pfam Cation transporting ATPase, C-terminus 447 526 IPR006068 -
Mal5g5207 556 Gene3D - 166 224 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g5207 Mal-Chr5 126004064 126010676 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g5207 11 555 Primary Pumps ATPases AT5G57110 63.396 0.0 788
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g5207 K01537 - gmx:100792945 858.596
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g5207 5 126004064 126010676 Mal4g3373 4 98840010 98851674 PCT