Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g5202 ATGGTTGTAGATCCAGTAATGATTCCGAAGATGATGAAGATGGATGAACAAAGAGCTATTCAAGAAGCTGCTTCTGCTGGTTTGAAAAGCATGGAGCATCTCATTCGTGTTCTCTCTTCTCAAACTTCATCTTCTTGTTCTTCTTCAAATCAACCCAACCGTTTAGATCTGGTCAATAAACTTGATTGCACAGAAATTACTGATTTCACTGTTTCCAAGTTTAAACAGGTTATTAACTTGTTAAATCGTACTGGTCACGCTCGTTTTCGTCGTGCACCTTCTAATCCTTCTTCTTCTTCTTCTTCTCAATCTCAATCTCAATCTGGATCTCATCTTCAACCTGAGAAATTCAACGTTAAACCACAGTTAACGAATCTTGATTTTGCAAAACCGGTCCAATTAGTTAAGTCAAATCTAAATCCAAATCCAAATCTCAAACCTAAAACTATTCCATCTACAGATTTATCTGTTTCTCAATACTCTAAATCAAAGGAAGCATATAGCATCTCCACCACTACTTCTTCATTCATGTCCACCATCACCGGAGATGGAAGCGTTTCAGACGGTAAAATAGGTCCAATCATTTCCTCCGGCAAGCCTCCTCTTGCTTCATCTCACCGGAAAAGGTGTCACGAAGCCACCATCTCCGGCAAAGTCTCGTCCTCCAGTCACTGTCATTGCTCCAAGAGAAGGAAATCTCGTGTGAAGAGAACAATTCGAGTTCCGGCGATAAGTTCAAAAGTTGCCGATATACCATCAGACGAATTCTCATGGAGGAAATACGGTCAAAAACCTATTAAAGGTTCACCTTACCCACGTGGTTACTACAAGTGCAGTAGCTTCAAAGGATGTCCGGCGAGGAAGCATGTAGAAAGAGCACAAGATGATCCCAATATGCTTGTTGTTACCTATGAAGGAGAGCACCGTCACGCGCAAACCGTCGTAACCGGTGCCGGATTCACATCTCAGCCTCGTTAA 978 0.4192 MVVDPVMIPKMMKMDEQRAIQEAASAGLKSMEHLIRVLSSQTSSSCSSSNQPNRLDLVNKLDCTEITDFTVSKFKQVINLLNRTGHARFRRAPSNPSSSSSSQSQSQSGSHLQPEKFNVKPQLTNLDFAKPVQLVKSNLNPNPNLKPKTIPSTDLSVSQYSKSKEAYSISTTTSSFMSTITGDGSVSDGKIGPIISSGKPPLASSHRKRCHEATISGKVSSSSHCHCSKRRKSRVKRTIRVPAISSKVADIPSDEFSWRKYGQKPIKGSPYPRGYYKCSSFKGCPARKHVERAQDDPNMLVVTYEGEHRHAQTVVTGAGFTSQPR* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g5202 325 MobiDBLite consensus disorder prediction 88 114 - -
Mal5g5202 325 Pfam Plant zinc cluster domain 207 250 IPR018872 -
Mal5g5202 325 SUPERFAMILY WRKY DNA-binding domain 250 311 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mal5g5202 325 SMART WRKY_cls 252 312 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal5g5202 325 MobiDBLite consensus disorder prediction 91 114 - -
Mal5g5202 325 Gene3D WRKY domain 237 313 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mal5g5202 325 ProSiteProfiles WRKY domain profile. 247 313 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal5g5202 325 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 10 322 IPR044810 GO:0003700
Mal5g5202 325 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 10 322 - -
Mal5g5202 325 Pfam WRKY DNA -binding domain 254 310 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g5202 Mal-Chr5 125960646 125962220 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g5202 1 315 WRKY Transcription Factor Family AT2G24570 51.205 1.30e-95 284
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mal5g5202 WRKY 1.4e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g5202 - - gmx:732589 391.734
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g5202 5 125960646 125962220 Mal5g5202 5 125960646 125962220 ECH
Mal6g1346 6 24044352 24046145 Mal5g5202 5 125960646 125962220 PCT