Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g5199 ATGGGTAACTGCTTAACTACAAGTCTTCAATCCTCAGGCGATCATCCCAACTCCAGTACTGCCCCTGACAACAACAACAATCCATCAGGGAGTTTTCCGTTTTCTGCTGGTCTCAGCAACTTAAGATTGATAAGAAATGGCAATTCCACATCTCTTGGGCGTAGTAGCAACTCTGGAGGAAATAGCAGACTATTTAGTAGTAGTAATAATCACTCAACAGGCAATAATACAAGTACATCCTTTTGGGGCTCTGAGAATAGCCAGGCCTCTCGAGTAAGAGATGAGGAGGAGTTTCCTTATGGGCATATCTTGGATGCTGCAAACTTGAAAGTTTTTACTTTGGCAGAACTGAAAGCAGCCACTAGAAATTTCCGTGCGGATACTGTATTAGGAGAGGGTGGGTTTGGTAGAGTATACAAGGGTTTGTTTAAGGAGAAGGCAACATCAAAAAGAGACGAGGGTTTGACTATTGCCATCAAGAAATTAAATTCTGACAGCAGGCAAGGAGTTGCAGAATGGCAGTCAGAGGTGAATTTCTTAGGAAGGCTTTCTCATCCAAACCTTGTAAAGTTGTTGGGATTTGGGCGTGAGGACGACGAGCTATTTCTGGTGTATGAATTTTTGCACCGTGGCAGCTTGGATAACCACATATTTGGAAGAGGCTCAAGTGTTCAGCCACTTTCATGGGATAGAAGGCTGAAAATTATGATTGGAGCAGCAAGGGGTCTAAATTTCCTTCACTCATTGGAGAAGAAAATTATATACAGAGATTTCAAGCCCTCTAATATACTACTTGACAAGGCATACACGGCCAAGTTATCAGACTTTGGCTTGGCCAGATCTATTCCTTCTGATGATCACACTCACGTATCAACACAGATTGTAGGAACATGCGGCTATGCTGCTCCGGAGTACATTGCCACAGGTCATTTGTACGTGAAAAGTGATGTGTATGGATATGGGATTGTTTTGTTGGAGATATTAACAGGTAAGCGGATAGGGGAGATAACACGCCTTAGTCAGCCAAAGTCCTTACGTGACTGGCTCAAATCAAACCTGTTAAATAGAGGGAAGTTGAGAAGCAACATGGATGCAAAGTTGGAAGGAAGGTATCCACCCAACTTAGCTTCACAAGTAGCTCAACTTGCTTTCAAATGCATCCAAACAGAACCCAAAATTAGGCCATCAATGAAGGAAGTTGTTGAAACATTGGAACAGATTGAAGCAGCGAATGAGAAACCGGCTGATAATATAAAAAGGACTGTGAATTCCCGGGCAGTTCAACTAGATGGTGGTTAA 1299 0.4273 MGNCLTTSLQSSGDHPNSSTAPDNNNNPSGSFPFSAGLSNLRLIRNGNSTSLGRSSNSGGNSRLFSSSNNHSTGNNTSTSFWGSENSQASRVRDEEEFPYGHILDAANLKVFTLAELKAATRNFRADTVLGEGGFGRVYKGLFKEKATSKRDEGLTIAIKKLNSDSRQGVAEWQSEVNFLGRLSHPNLVKLLGFGREDDELFLVYEFLHRGSLDNHIFGRGSSVQPLSWDRRLKIMIGAARGLNFLHSLEKKIIYRDFKPSNILLDKAYTAKLSDFGLARSIPSDDHTHVSTQIVGTCGYAAPEYIATGHLYVKSDVYGYGIVLLEILTGKRIGEITRLSQPKSLRDWLKSNLLNRGKLRSNMDAKLEGRYPPNLASQVAQLAFKCIQTEPKIRPSMKEVVETLEQIEAANEKPADNIKRTVNSRAVQLDGG* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g5199 432 CDD STKc_IRAK 130 407 - -
Mal5g5199 432 ProSitePatterns Serine/Threonine protein kinases active-site signature. 253 265 IPR008271 GO:0004672|GO:0006468
Mal5g5199 432 ProSitePatterns Protein kinases ATP-binding region signature. 130 161 IPR017441 GO:0005524
Mal5g5199 432 MobiDBLite consensus disorder prediction 1 32 - -
Mal5g5199 432 Gene3D Transferase(Phosphotransferase) domain 1 208 429 - -
Mal5g5199 432 Gene3D Phosphorylase Kinase; domain 1 84 207 - -
Mal5g5199 432 SUPERFAMILY Protein kinase-like (PK-like) 104 404 IPR011009 -
Mal5g5199 432 MobiDBLite consensus disorder prediction 47 88 - -
Mal5g5199 432 Pfam Protein tyrosine and serine/threonine kinase 127 404 IPR001245 GO:0004672|GO:0006468
Mal5g5199 432 PANTHER OS01G0588500 PROTEIN-RELATED 12 431 - -
Mal5g5199 432 PANTHER TRANSFERASE, PROTEIN KINASE RLK-PELLE-RLCK-VIIA-2 FAMILY-RELATED 12 431 - -
Mal5g5199 432 ProSiteProfiles Protein kinase domain profile. 124 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g5199 Mal-Chr5 125886283 125889128 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g5199 110 404 Glycoside Hydrolase AT3G07070 42.568 2.64e-80 252
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Mal5g5199 PK_Tyr_Ser-Thr 6.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g5199 - - gmx:100813304 623.624