Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g5194 ATGGAAAAAGATGAAGAATGCAACACAGGTTTATGTCTTGGATTGGGAATGGGAGGAGGAAACGTGACAAAAAAGGAGAAGAAGTTGAAAATAGTGAACAAACCTGTGATGGCACCTTGTTTCGACCTAGCGTTTGAGCTTTGTCCAAAAGGTGAACCCATACATGTGAATCAACATAATAACAAGGTTGAGAGACAACAATATTATCCCAATGCAACCTGCAGCACCGATTCTGATAATAACAACAACAACAACGACGACGACAATCGTAGAAAGAAACTGAGGCTAACAAAGGAGCAATCATTCATGCTTGAGAGCACCTTCAAGCTCCATAACACTCTTAATCCGATTCAGAAAAATGCACTTGCTGACCAATTGAGTTTAAAGACTAGACAAATTGAAGTTTGGTTTCAGAACAGGAGAGCAAGGACGAAGCTGAAGCAGATAGAGGTGAATTATGAGTTGTTGAAAAAACATTGTCAAAATCTAAGTGATGAGAACAAAAGATTGAAGAAGGAATTGCAGGACCTAAAAGTTGGACAATCTCCGTTATGCCCTCAACGTCTAACAAAACCAGTGACTGTGTGCTCTTCCTGTGAGCATAAACTGTTGAAGCGCAATGAAGATCAGAAGAAGAATAATTAA 645 0.3938 MEKDEECNTGLCLGLGMGGGNVTKKEKKLKIVNKPVMAPCFDLAFELCPKGEPIHVNQHNNKVERQQYYPNATCSTDSDNNNNNNDDDNRRKKLRLTKEQSFMLESTFKLHNTLNPIQKNALADQLSLKTRQIEVWFQNRRARTKLKQIEVNYELLKKHCQNLSDENKRLKKELQDLKVGQSPLCPQRLTKPVTVCSSCEHKLLKRNEDQKKNN* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g5194 214 PANTHER HOMEOBOX ASSOCIATED LEUCINE ZIPPER PROTEIN 7 209 - -
Mal5g5194 214 ProSitePatterns 'Homeobox' domain signature. 122 145 IPR017970 GO:0000981|GO:0006355
Mal5g5194 214 CDD homeodomain 90 148 IPR001356 GO:0003677
Mal5g5194 214 SUPERFAMILY Homeodomain-like 71 148 IPR009057 -
Mal5g5194 214 SMART halz 147 187 IPR003106 GO:0006355|GO:0043565
Mal5g5194 214 Pfam Homeodomain 90 145 IPR001356 GO:0003677
Mal5g5194 214 MobiDBLite consensus disorder prediction 72 91 - -
Mal5g5194 214 Gene3D - 71 150 - -
Mal5g5194 214 ProSiteProfiles 'Homeobox' domain profile. 87 147 IPR001356 GO:0003677
Mal5g5194 214 Pfam Homeobox associated leucine zipper 147 178 IPR003106 GO:0006355|GO:0043565
Mal5g5194 214 PANTHER - 7 209 - -
Mal5g5194 214 SMART HOX_1 89 151 IPR001356 GO:0003677
Mal5g5194 214 Coils Coil 139 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g5194 Mal-Chr5 125845215 125846367 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g5194 60 200 Homeobox Transcription Factor Family AT3G60390 53.741 3.69e-42 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Mal5g5194 Homeodomain 5.1e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g5194 K09338 - gmx:100812222 207.223
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g5194 5 125845215 125846367 Mal4g3359 4 98374292 98376181 PCT