Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g5191 ATGTCAATACCGACCAAGACGGCTCAACTTCAACTTCAACAAGAACACTTTCTTCTAACAATGCCTCGTAGATTACTCCAACTCCAAGAGACACCTCCTTCCTCCTCCTCTTCTTCCTCGCCGCACCACATCTCTGGAGCTTTGTTTTTTTTCCTTGGAGGGATTGTAGTGCTCATCATTTTGCTCATTCTTCTCTTTGTATTTTGGAAGCATATTAAACGTAGCAGGGGCAAAACAGAAGAACTACCTGAGGAGACAGCTCCACCACCTAGTCAGACACAGAAGCATGGCAATTTACCAGAAGAGGTGATGAAGAAGATTGTCCCAACTAATCAACAATCAGGATTCATGGAGTTCATTAGTGGGAACCTTAGGACAATTAGCTACTTTGATTTCCAGACATTGAGGAAGGCAACCAAGAATTTCCATCGCAGAAATCTTCTAGGAAGTGGTGGATTTGGCCCTGTCTATCAGGGAAAGTTGGCAGATGGAAGGCTGGTTGCTTGCAAGAAATTGTCTCTTGACAAATCTCATCAAGGAGAAAGAGAATTTCTCGCAGAAGTGAGAATGATCACAAGCATCCAACACAAAAATCTAGTTCGCCTTCTCGGATGTTGCTCAGATGGACCTCAAAGGATACTTGTCTACGAATACATGAAGAACAGAAGTTTGGACCTCTTTATACATGGCAAGAGTGATGAATTTCTCAACTGGAGCACTCGATTCCAAATTATTCTTGGAGTAGCGCGGGGATTGCAATACCTTCACGAGGATTCACATGTAAGAATTGTTCACCGAGATATCAAAGCAAGCAACATTCTTCTTGACGAAAAGTTTCAGCCGAGGATTGGAGATTTTGGGCTAGCTAGGTTCTTTCCTGAAGACCAAGCTTACCTTAGCACTCAATTCGCAGGAACATTAGGTTATACAGCTCCTGAATATGCAATTAGAGGAGAACTATCTGAAAAGGCAGACATCTATAGTTTTGGAGTTCTTTTGCTTGAAATCATCAGCTGCAGAAAAAACACAGATCTCACTTTACCATCAGATATGCAGTACCTTCCTGAATATGCATGGAAACTTTATGAGAAGTCAATGGTAATGGAACTTATAGATCCAAAGCTGAGAGAAAAAGGATATGTAGAAAAGGATGTTATGCAAGCATTCCATGTGGCCTTTTTATGCCTTCAGCCACATCCAGATTTAAGACCTGCAATGTCACAGATTGTAGCATTGTTGACATTTAAAATTGGTATGGTTACAACACCAATGAGGCCAGCTTTTCTTGATCGAAGGCGCGTAATGGACGATGAGAACCATTCTTGGGAAGTCATTTCCGAGGTTTTACAAACTCCTGTAGCTAGTGAATATTCTATGTTATAA 1383 0.4143 MSIPTKTAQLQLQQEHFLLTMPRRLLQLQETPPSSSSSSSPHHISGALFFFLGGIVVLIILLILLFVFWKHIKRSRGKTEELPEETAPPPSQTQKHGNLPEEVMKKIVPTNQQSGFMEFISGNLRTISYFDFQTLRKATKNFHRRNLLGSGGFGPVYQGKLADGRLVACKKLSLDKSHQGEREFLAEVRMITSIQHKNLVRLLGCCSDGPQRILVYEYMKNRSLDLFIHGKSDEFLNWSTRFQIILGVARGLQYLHEDSHVRIVHRDIKASNILLDEKFQPRIGDFGLARFFPEDQAYLSTQFAGTLGYTAPEYAIRGELSEKADIYSFGVLLLEIISCRKNTDLTLPSDMQYLPEYAWKLYEKSMVMELIDPKLREKGYVEKDVMQAFHVAFLCLQPHPDLRPAMSQIVALLTFKIGMVTTPMRPAFLDRRRVMDDENHSWEVISEVLQTPVASEYSML* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g5191 460 Gene3D Phosphorylase Kinase; domain 1 104 218 - -
Mal5g5191 460 PANTHER RECEPTOR-LIKE KINASE 120 427 - -
Mal5g5191 460 SUPERFAMILY Protein kinase-like (PK-like) 124 415 IPR011009 -
Mal5g5191 460 CDD STKc_IRAK 148 414 - -
Mal5g5191 460 ProSiteProfiles Protein kinase domain profile. 142 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g5191 460 MobiDBLite consensus disorder prediction 78 97 - -
Mal5g5191 460 ProSitePatterns Serine/Threonine protein kinases active-site signature. 263 275 IPR008271 GO:0004672|GO:0006468
Mal5g5191 460 Gene3D Transferase(Phosphotransferase) domain 1 219 418 - -
Mal5g5191 460 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 120 427 - -
Mal5g5191 460 Pfam Protein tyrosine and serine/threonine kinase 145 412 IPR001245 GO:0004672|GO:0006468
Mal5g5191 460 SMART serkin_6 142 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g5191 Mal-Chr5 125817027 125820111 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g5191 130 429 Receptor kinase-like Gene Family AT1G56120 49.667 1.04e-97 311
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mal5g5191 PK_Tyr_Ser-Thr 2.6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g5191 - - ccaj:109792436 651.358
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g5191 5 125817027 125820111 Mal5g5191 5 125817027 125820111 ECH
Mal5g5191 5 125817027 125820111 Mal4g3358 4 98349466 98356184 PCT