Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g5176 ATGAAGATGGTTTTAGCATTCATGTTGCAGCTGGTGAAGCTCTGCATCATCATAGGCTTTGCAGTGGCAATCCAAGGATCCAAAGGACTTGTTATATCCCCATCTCGAGCAAATTTACATGTGTCTCCAATAGCATTATCACCACCATACGAAGTTGTTTCTTCACTATCAACTGTGCAAGGGAATATAACACCACCAAAGAAAGCACCTGTTGTTAGGCCTCGTATCTCAACAACTACTGCTCCAGCTCCTGCTGCACAAAAAGCAAGACAATTACATCATGCTCCTCAGCCATTAACCTCACCTTCTTCCAATAAAGAAAATCAATCTCCTGCATTGACACCTTCAGCTTCAAATTATAAACATCATCATACAAGGAACATAATTACCATCCCGGCTCCAGCATCATCATATATGGTTTCTCCTCCCATTTCAAGACCTCGAGGTAGAGCAATTCCTCCCTCATTATCGCCAACTGGTGGAGAAAGACATCATATTCCACTACCATTGAACTCAGATTGTATATCAACTGTCTGCACAGAGCCTTATGTAACTTCTCCTCTTGGAGCACCTTGCAGATGTGTCTGGCCAATGCGTGTCGGTCTTCGCCTTAGCATTTCTCTTTATACCTTCTTCCCTTTGGTCTCGGAGCTGGCTTCTGAACTTTCCAGTGGGGTTTCCATGAAGCAAAGTCAAGTTAGAATTATGGGAGCCAATGCAGCAAACCAACAACCTGATAAAACTGTTGTCCTTATTGATTTGGTGCCACTTGGGGAGAACTTTGATAATTCTACAGCCTTTTTGACTTCTAATAGGTTTTGGCATAAAAAGGTTGTTATTAAAACCTCCTACTTTGGAGACTATGATGTGTTATATGTGAGCTATCCAGGTTTACCTCCTTCTCCTCCTATACCACCTTCAAGCATTACCATGATAGATGGTGGTCCTTATACCGCAGATGGCAATAATGGAAGTACAGTAAAGCCCCTTGGAGTTGACATACAGAAGAGGCAGAATAGAGGTGACCTTAGCAAAGGCTTTATTGTCATTATTGCTGTTTCAGTTTTTGTAGCAGTTGTTTTATGTACTGCTGCTGTCTGGTTCATGTTCAAATTCAGAGTTCATGTTAGTCAAAGAGCGTCAATTCCACGGCTTTCACCTCCTTCTCTTACCAAAGCATCAGTTACTGTTACTGGTTCATTAATTGGAGATGGAAGGGTTGGTTCCCTTTCCTCTTCATTTGAATATGACATCACTGCTTATAAAGGGTCTGCTAAGACTTTCAGTATGGATGAGATTGAGAAAGCTACTGACAATTTTCATGCTTCAAGAATACTTGGAGAAGGTGGTTTTGGTCTTGTTTACAGTGGTGTCCTTGGAGATGGGACAAAAGTGGCAGTCAAGGTTTTAAAGTGTGAGGATCATCAAGGTGATCGCGAATTCTTAGCTGAAGTTGAGATGCTTAGTCATCTTCACCATAGAAATCTCGTCCAGCTGATTGGTATATGTGCTGAGGACAGCTTCCGCTGCTTGGTTTATGAACTTATTCCAAATGGCAGCTTGGAATCCCATTTACATGGGGTTGACAGGAAAAAGTGCACACTTGATTGGGGTGCTAGGATGAAGATAGCTCTTGGTGCAGCTCGTGGTCTATCTTATCTGCATGAAGATTCAAGTCCGTGTGTTATACATAGGGACTTCAAGTCTAGCAACATATTGTTGGAAGATGATTTCACTCCTAAAGTATCTGATTTTGGATTGGCCCGGACGGCTACAGATAAGGAAAGTAGACACCTATCAACGCGTGTCGTGGGAACTTTTGGTTACGTGGCTCCGGAGTATGCAATGACTGGTCATCTTCTTGTTAAGAGTGATGTTTATAGCTACGGTGTTGTTCTTCTAGAGCTTTTGACAGGAAGAAAACCTATAGACATGTCACAAGCTCCTGGTCAAGAGAATCTCGTTGCTTGGGCTCGTCCATTTCTCACAAGTAAAGAAGGATTAGAAGCAATAATAGATCCATCTATAGGACTCGATGTGCCTTTTGATAGTGTGGCCAAAGTAGCAGCCATTGCTTCAATGTGTGTGCAAGAAGAAGTATCGAACCGTCCATTCATGAGTGAAGTTGTTCAGGCTTTGAAACTTGTATGCAATGAATGTGAAGAAGCAAAAGAAGGTGCTGCTGGTTCAAGAAGTTCTAGCCAAGAACACGAAGATTTATCTGTTGTTGACATTGAAAGAGGCTTGTCACCATCAGAATTTTTCAGTTCATCATCTAGAATTGGAAGAATGGAAAATGAAACATCTAGAAGAAAGTCTTATTCAGGTCCTATGGGAAATGGAAGAAGCAGACAGTTGTGGCAGATAATGAGAAAGCTTTCTGGTGGTAGTGTCAGTGAACATGGAACTATATGA 2415 0.4186 MKMVLAFMLQLVKLCIIIGFAVAIQGSKGLVISPSRANLHVSPIALSPPYEVVSSLSTVQGNITPPKKAPVVRPRISTTTAPAPAAQKARQLHHAPQPLTSPSSNKENQSPALTPSASNYKHHHTRNIITIPAPASSYMVSPPISRPRGRAIPPSLSPTGGERHHIPLPLNSDCISTVCTEPYVTSPLGAPCRCVWPMRVGLRLSISLYTFFPLVSELASELSSGVSMKQSQVRIMGANAANQQPDKTVVLIDLVPLGENFDNSTAFLTSNRFWHKKVVIKTSYFGDYDVLYVSYPGLPPSPPIPPSSITMIDGGPYTADGNNGSTVKPLGVDIQKRQNRGDLSKGFIVIIAVSVFVAVVLCTAAVWFMFKFRVHVSQRASIPRLSPPSLTKASVTVTGSLIGDGRVGSLSSSFEYDITAYKGSAKTFSMDEIEKATDNFHASRILGEGGFGLVYSGVLGDGTKVAVKVLKCEDHQGDREFLAEVEMLSHLHHRNLVQLIGICAEDSFRCLVYELIPNGSLESHLHGVDRKKCTLDWGARMKIALGAARGLSYLHEDSSPCVIHRDFKSSNILLEDDFTPKVSDFGLARTATDKESRHLSTRVVGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPIDMSQAPGQENLVAWARPFLTSKEGLEAIIDPSIGLDVPFDSVAKVAAIASMCVQEEVSNRPFMSEVVQALKLVCNECEEAKEGAAGSRSSSQEHEDLSVVDIERGLSPSEFFSSSSRIGRMENETSRRKSYSGPMGNGRSRQLWQIMRKLSGGSVSEHGTI* 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g5176 804 ProSitePatterns Protein kinases ATP-binding region signature. 446 468 IPR017441 GO:0005524
Mal5g5176 804 PANTHER OS01G0750732 PROTEIN 167 803 - -
Mal5g5176 804 ProSitePatterns Serine/Threonine protein kinases active-site signature. 562 574 IPR008271 GO:0004672|GO:0006468
Mal5g5176 804 MobiDBLite consensus disorder prediction 64 121 - -
Mal5g5176 804 Gene3D Phosphorylase Kinase; domain 1 411 515 - -
Mal5g5176 804 MobiDBLite consensus disorder prediction 754 782 - -
Mal5g5176 804 ProSiteProfiles Protein kinase domain profile. 440 716 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g5176 804 CDD STKc_IRAK 446 714 - -
Mal5g5176 804 MobiDBLite consensus disorder prediction 94 121 - -
Mal5g5176 804 SUPERFAMILY Protein kinase-like (PK-like) 421 713 IPR011009 -
Mal5g5176 804 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 62 166 - -
Mal5g5176 804 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 167 803 - -
Mal5g5176 804 PANTHER OS01G0750732 PROTEIN 62 166 - -
Mal5g5176 804 Pfam Protein tyrosine and serine/threonine kinase 442 713 IPR001245 GO:0004672|GO:0006468
Mal5g5176 804 Gene3D Transferase(Phosphotransferase) domain 1 516 739 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g5176 Mal-Chr5 125680318 125685405 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g5176 171 803 Receptor kinase-like Gene Family AT5G56890 62.991 0.0 800
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Mal5g5176 PK_Tyr_Ser-Thr 1e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g5176 - - cam:101491795 1218.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g5176 5 125680318 125685405 Mal5g5176 5 125680318 125685405 ECH