Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g5162 ATGGCGGTGGCACACGGTGGTTACGACGGTGAAATCGGTGGCTACAATTCTCGTCTAATCCCATCAATAAAACCAGAGTTATTCAACGACACTGCAAATTCAAGCTCTTGTGAATACGACGACGTTTTAAGCGAAAGAAAAGATTCAGTACTAACCGAAGAAGAAGAAGAAGAAGGTGCTACACCTTCTCACGCAATTCACATCAAAGAGGAGGTTGTTGAAGACGAATCATCATCGATGAAGTTTCCGAAGCCAATGGAAGGGTTGCATGAGGTTGGTCCACCACCGTTTCTGAAGAAGACTTTTGAAATGGTGGAGGATCCGGAAACTGACCCGATTGTTTCGTGGAGTGCTTCTCGTGATAGTTTTGTTGTTTGGGACTCTCATGAATTCTCTAAAATTCTTCTTCCTAAATACTTTAAGCATAATAATTTTTCTAGCTTCATTCGCCAGCTCAACACCTATGGGTTTAGGAAGGTTGATTCAGACCGTTGGGAGTTTGCAAATGAAGGGTTTCAAGGAGGGAAGAAGCATTTGTTGAAGAACATAAGAAGGAGAAGTAAGTATAACAAACTGCATCAAGGAGGATTCAATTTGATGAATCCTGGTGTTGAATCCGAAGTGGAGAAACTGAAAAAAGATCAGAACATGTTGAAATTGGAAATTCTGAAGCTAAGGCAACAACAAGAGAATTCAAATATTCAACTCACAAATGTTCAGGAGCGAGTTCGGCGCGCGGAATCGAAGCAATATCAGATGCTATTTTTCCTCACTAAAATGGCCAAAAGGCCATTGTTTATGGAGCAGATAATCCAGAAAATTAAGAGAAAAAGAGAAGTTGATGGTAATATAGACATGATTAAGAGACCTAGATTGCTTGGAACACAAGGTACGTGTGTTGATTATAGGTGTCAGGGTCGTGAACAATTTGCTACTTTACAATCTGAATTGAATGGACTTTTTCCTGAAAATATGAGCACTGGTAGAATGGAACAACCTGTTTCCACTCCTATGGAAGATGGATTGTGTAACTCTTTACATGAATTGAGGGCTTCTGGTGGTTCTAGACAAAGTGTTCAAGATGTATCTTCTGCTTATCTTGTCATGTCAGAGAAACTATTGGGGGAAAATTCTGTTGTTGATGAAGAAATGGATGTGAATGACTCTAATATCTATCTTGAATTAGAGGATTTGATAAGCAAGCCAACAGATTGGGGTGGATCTACTAGTGGATTGGTGGGACAAACTAGTTGA 1254 0.3995 MAVAHGGYDGEIGGYNSRLIPSIKPELFNDTANSSSCEYDDVLSERKDSVLTEEEEEEGATPSHAIHIKEEVVEDESSSMKFPKPMEGLHEVGPPPFLKKTFEMVEDPETDPIVSWSASRDSFVVWDSHEFSKILLPKYFKHNNFSSFIRQLNTYGFRKVDSDRWEFANEGFQGGKKHLLKNIRRRSKYNKLHQGGFNLMNPGVESEVEKLKKDQNMLKLEILKLRQQQENSNIQLTNVQERVRRAESKQYQMLFFLTKMAKRPLFMEQIIQKIKRKREVDGNIDMIKRPRLLGTQGTCVDYRCQGREQFATLQSELNGLFPENMSTGRMEQPVSTPMEDGLCNSLHELRASGGSRQSVQDVSSAYLVMSEKLLGENSVVDEEMDVNDSNIYLELEDLISKPTDWGGSTSGLVGQTS* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g5162 417 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 73 405 IPR027725 -
Mal5g5162 417 Coils Coil 208 249 - -
Mal5g5162 417 ProSitePatterns HSF-type DNA-binding domain signature. 136 160 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mal5g5162 417 PRINTS Heat shock factor (HSF) domain signature 97 120 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mal5g5162 417 PRINTS Heat shock factor (HSF) domain signature 135 147 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mal5g5162 417 PRINTS Heat shock factor (HSF) domain signature 148 160 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mal5g5162 417 MobiDBLite consensus disorder prediction 45 65 - -
Mal5g5162 417 SUPERFAMILY "Winged helix" DNA-binding domain 93 186 IPR036390 -
Mal5g5162 417 Pfam HSF-type DNA-binding 97 186 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mal5g5162 417 Gene3D - 90 187 IPR036388 -
Mal5g5162 417 PANTHER HEAT STRESS TRANSCRIPTION FACTOR A-9 73 405 - -
Mal5g5162 417 SMART hsfneu3 93 186 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g5162 Mal-Chr5 125496747 125498801 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g5162 83 370 HSF AT2G26150 45.455 2.76e-77 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Mal5g5162 HSF_DNA-bind 1.5e-32 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g5162 K09419 - gmx:100818430 545.814
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g5162 5 125496747 125498801 Mal5g5162 5 125496747 125498801 ECH