Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g5158 ATGGAACCTCGTGTTGGGAATAAGTTTCGGCTTGGTAGGAAGATCGGTAGCGGTTCCTTTGGAGAGATCTACTTAGGTACTAATATTCAAACTAACGAAGAGGTTGCAATTAAGCTTGAAAATGTCAAGACTAAACATCCTCAGCTGCTGTACGAGTCTAAGTTGTACAGAATTCTCCAGGGAGGAACTGGAATTCCAAATGTTAGATGGTTTGGAGTAGAGGGAGATTACAATGTTTTAGTGATGGATCTGCTTGGACCTAGTCTGGAAGATCTCTTTAACTTTTGTAGTAGAAAGTTATCACTAAAGACAGTTCTTATGCTTGCTGATCAAATGATCAACCGTGTTGAATTCATTCATTCGAAATCATTTCTACATCGAGATATCAAACCGGATAATTTTCTAATGGGATTAGGAAGGCGTGCGAACCAGGTTTATGCTATTGATTTTGGTCTGGCTAAGAAATACAGAGATAGTTCAACCCATCAACACATTCCTTACAGGGAAAATAAAAACTTGACTGGAACTGCAAGATATGCTAGCATGAATACTCACCTTGGCATTGAACAAAGTCGAAGAGATGATTTAGAGTCTCTTGGTTATGTTTTGATGTACTTCCTGAGAGGGAGTCTTCCTTGGCAGGGACTTAAAGCAGGAACCAAGAAACAGAAGTATGAGAAAATCAGTGAAAAAAAGGTTTCTACATCGATTGAAGCCTTATGTCGGGGTTATCCAACCGAATTTGCATCATATTTTCATTACTGCCGCTCATTAAGGTTTGATGATAAGCCAGATTATGCTTATCTCAAAAGGATATTCCGCGACCTGTTTATTCGTGAAGGATTCCAGTTTGATTATGTGTTCGACTGGACCATCTTGAAGTATCAGCAGTCACAGCTTGCCACACCTCCAGCACGGGCCATTGCTCCTGGTGCTGGAACCAGTTCTGCAATGCCACCTGGTATTACCAATGCTGATAGACATACAGGAGCTGAAGAAGGGCAACCCCCTGGTTTGGTTTCGGTGGATTCCTCGAGGCGCAGAATGTCAGGACCCATTTTGAATACTTTATCAAGTTCCAATGTCTTGGGTCAGTCAAGTGGATCATCTAGGCGAGTCGCTGTTTCTAGTAGCCGCGATGCATTTGTTGGTGCGGAGTCAGATATTCGTACACGCACTGCTGAGGCTAGCCCTGGAGCAGCACACAGATTTTTGGGCGGTCAAAGAAGTTCACCAATCGGATCTTCTGATCCGCAGAGAGTAGCACGGGCTGGGAGAAATGCTTCTCAAGCCAATAACTATGAAAGTGCCCTTAGGGGCATAGAGGGTTTGCAGTTAGAGAATGATGAGAGGACCCATTATTAA 1365 0.4308 MEPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKLYRILQGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFIHSKSFLHRDIKPDNFLMGLGRRANQVYAIDFGLAKKYRDSSTHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRIFRDLFIREGFQFDYVFDWTILKYQQSQLATPPARAIAPGAGTSSAMPPGITNADRHTGAEEGQPPGLVSVDSSRRRMSGPILNTLSSSNVLGQSSGSSRRVAVSSSRDAFVGAESDIRTRTAEASPGAAHRFLGGQRSSPIGSSDPQRVARAGRNASQANNYESALRGIEGLQLENDERTHY* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g5158 454 ProSiteProfiles Protein kinase domain profile. 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g5158 454 MobiDBLite consensus disorder prediction 409 434 - -
Mal5g5158 454 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Mal5g5158 454 Gene3D Transferase(Phosphotransferase) domain 1 1 310 - -
Mal5g5158 454 MobiDBLite consensus disorder prediction 348 376 - -
Mal5g5158 454 SUPERFAMILY Protein kinase-like (PK-like) 5 290 IPR011009 -
Mal5g5158 454 SMART serkin_6 9 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g5158 454 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Mal5g5158 454 PANTHER CASEIN KINASE I-LIKE 1 309 - -
Mal5g5158 454 MobiDBLite consensus disorder prediction 393 434 - -
Mal5g5158 454 MobiDBLite consensus disorder prediction 306 380 - -
Mal5g5158 454 Pfam Protein kinase domain 10 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g5158 454 PANTHER CASEIN KINASE-RELATED 1 309 - -
Mal5g5158 454 PANTHER CASEIN KINASE I-LIKE 356 434 - -
Mal5g5158 454 PANTHER CASEIN KINASE-RELATED 356 434 - -
Mal5g5158 454 CDD STKc_CK1_delta_epsilon 8 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g5158 Mal-Chr5 125454904 125461056 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g5158 7 223 EF-hand Containing Proteins AT2G17890 26.667 1.06e-13 71.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Mal5g5158 Pkinase 1e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g5158 K02218 - gmx:100785851 845.114
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g5158 5 125454904 125461056 Mal5g5158 5 125454904 125461056 ECH
Mal5g5158 5 125454904 125461056 Mal4g2987 4 89799885 89807823 PCT