Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g5142 ATGGAAGAAATATCTTCAAGTGTTGCAGTGCCATTTACACTTGGAAATTTGATTCAAAAGGATGCTGCAGTTACAACTCACATGGAAATAACCGGGTTGAAGCTTATGGCAAATACAGCAGCAGCTTTGATATTAAATCCTGCAGTTGGAAATGAAAATCATGCTGATGTTAGTCTTCAACATCAAATCACGGTATCTGCGGAGGTGAAGGAGAACCAAGTTGGAGCCGCTGTTGTATCAGAAATGGTGATTGAATGCGAGAGTAATTGGATCTTGAGTGAAAGCCATAACCAGGCAATAAAGGAAGATGAAATCATGCTGGCTGTGGATTTTCAGTGTTTGCATAATTCAGACTCTCAATCTGTGGCAGATTCACCAATAATTGTCACGGTTGGTGATGATGTTCGTGGTAAGTTTAGTATAAACGAGGTGCTTCCAGCACTAAAGCCAGAGATGAACACGGTTTCTATTGCAATGGATCTCGAGAGTGAAAATCGAAGTGCATCGGAAGAGGCTGATCCAAAATTATCTGCTATGGTTCTCAATCAGTTGCCAAAGGAGAACAACACATGTAGAACAAGCAACCAAATAAATGGTTTGGAATTGAGTGGTGGCCCTCTCTGGGGTTTCTCATCAATTTGTGGAAATAGACTGGAGATGGAAGATACTATTGCTGTTAAACCTCAACTTTTTCAGGTCCCTTCAAAGATGCTAATGGATGACCATTTGAATGAAAACACAAAATCCTCACCAGCCCATTTTTTTGGTGTCTATGATGGACATGGAGGCTTTCAGGTTGCTAATTACTGTCGAGAACGTCTTCATTCAGCGTTGATTGAGGAGATTGAAGCTCAACATTCAAGTTTGGCTGAAACGAATGTGAGAAACAATTGGCAGGAAGATTGGAAGAAAGTATTGTCTAATTGTTTTCAGAAAGTAGATGATGAGATTGAAACTCTTGCTCCTGAGACTGCTGGCTCCACTGCAGTGGTTGCCATTTTAAGTCAAACCCACATAATAGTTGCAAATTGCGGGGATTCAAGAGCTGTCTTGTATCGCGGGAAAGAAGCCATGGCGTTATCTTCTGATCACAAACCGAATCGAGAGGATGAGAGAGCAAGAATAGAAGCTGCAGGAGGAAGAGTCATACATTGGAAAGGGTACCGAGTTCTTGGTGTCTTGGCCATGTCAAGGTCCATAGGTGATAGATACTTGAAACCATGGATAATTCCAGACCCGGAAGTTTATATTGTGCAAAGAGAGAAAAACGATGAGTGCCTTATTATAGCAAGTGATGGTTTATGGGATGTAATGACAAATGAAGAAGCCTGTGATATTGCAAGGAAGCGAATCCTTCTTTGGCACAAGAAGTATGGTGACAACGGAGCAACAGTACATGACAAAGGAGAAGGAGGAGTTGATCTTGCATCTCACTCCGCCGCAGAGTATCTATCTAAACTCGCCCTCCACAGAGGAAGCGGCGATAACATCTCTGTAATTGTGATAGATTTAAAGGCTGTGAGAAAATTGAAGAGAAAGACATAA 1545 0.4168 MEEISSSVAVPFTLGNLIQKDAAVTTHMEITGLKLMANTAAALILNPAVGNENHADVSLQHQITVSAEVKENQVGAAVVSEMVIECESNWILSESHNQAIKEDEIMLAVDFQCLHNSDSQSVADSPIIVTVGDDVRGKFSINEVLPALKPEMNTVSIAMDLESENRSASEEADPKLSAMVLNQLPKENNTCRTSNQINGLELSGGPLWGFSSICGNRLEMEDTIAVKPQLFQVPSKMLMDDHLNENTKSSPAHFFGVYDGHGGFQVANYCRERLHSALIEEIEAQHSSLAETNVRNNWQEDWKKVLSNCFQKVDDEIETLAPETAGSTAVVAILSQTHIIVANCGDSRAVLYRGKEAMALSSDHKPNREDERARIEAAGGRVIHWKGYRVLGVLAMSRSIGDRYLKPWIIPDPEVYIVQREKNDECLIIASDGLWDVMTNEEACDIARKRILLWHKKYGDNGATVHDKGEGGVDLASHSAAEYLSKLALHRGSGDNISVIVIDLKAVRKLKRKT* 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g5142 514 CDD PP2Cc 209 504 IPR001932 -
Mal5g5142 514 PANTHER PROTEIN PHOSPHATASE 2C ABI2-LIKE PROTEIN 106 514 - -
Mal5g5142 514 ProSitePatterns PPM-type phosphatase domain signature. 254 262 IPR000222 GO:0043169
Mal5g5142 514 SUPERFAMILY PP2C-like 207 505 IPR036457 -
Mal5g5142 514 SMART PP2C_SIG_2 234 504 IPR001932 -
Mal5g5142 514 ProSiteProfiles PPM-type phosphatase domain profile. 207 504 IPR001932 -
Mal5g5142 514 SMART PP2C_4 197 502 IPR001932 -
Mal5g5142 514 Gene3D - 200 514 IPR036457 -
Mal5g5142 514 PANTHER ALPHABET, ISOFORM E-RELATED 106 514 - -
Mal5g5142 514 Pfam Protein phosphatase 2C 232 497 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g5142 Mal-Chr5 125259913 125262095 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g5142 200 513 PP2C-type Phosphatase Gene Family AT4G26080 62.145 3.56e-137 402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g5142 K14497 - gmx:100789207 713.761
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g5142 5 125259913 125262095 Mal5g5142 5 125259913 125262095 ECH
Mal5g5142 5 125259913 125262095 Mal4g2964 4 88879337 88882094 PCT