Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g5123 ATGATGAATGGAAGAAACAGGTATCCTTTTACTCCAACTCAGTGGCAAGAGCTTGAACATCAAGCTCTTATCTACAAATACATGGCTTCTGGTATTTCCATTCCTCCTGATCTTCTACTCACTATCAAAAGAAGCTACTTAGACTCTTCAAGGCTCTCACCTCACCAGTCTCAACACTTTGGGTGGAACTATTTGCCAATGGGATTGGGAAGAAAAATAGACCCAGAACCAGGGAGGTGTAGAAGAACAGATGGAAAGAAATGGAGGTGTTCAAAAGAAGCATATCCAGATTCAAAGTACTGTGAAAGGCACATGCATAGAGGGAAAAACCGTTCAAGAAAGCCTGTGGAAGTTTTGAAAACAACAACAAACACAGATGCTCCTGTAGTTTCTACTTCAACAATCTTATCAATCACTAAAAATAGTAATCTTGATTCTGATAACACTGCACCACTAACATCAACAACTCATCATGACACTAGTACTTACCATTACCCTCAACACTCTTCTTCTTATGCTTCTTCTTCCCATCTTAACCACTCTTTCCTTTACCATAACCCTCCACCCTCAAGGCCTAATTTCTCATTTCAAGACAACAGTGCTCCCTTGTTTCTTGACACTACTGGTTCTTCCTCTCACACTAACAACAACACTGATTGCAGGAACAGGTATGTTTATGGACTGAAAGAGGAGGTGGATGAACATGCTTTCTTCACAGAACCTTCTGGAACTATAAGAAGTTTATCAGCTTCTTCAATGGATGATTCATGGCAACTCACACCACTTACTATAAGCTCTTCTCCCTCTTTTAAACAGAGGAATTGCTCTGGTTTATCCAATGACAATGAGTACTCTTACTTGCAACTTCAAAGCCTAAGTGACAACAACTCAAAACAACCACAGCAAGATCAAGGTTGTTACATCTCAGGTAGTGAAGAAACATTCATGAAACATGGGAAAGAAGAACCTCAGAAGATTTTTCATCGTTTCTTTGATGAATGGCCACCTAAAAGCAGCAGAAACTCATGGCTTGATTTGGATGATAAATCATCCACTACTCAGCTTTCAATCTCCATTCCTACAACTTCTCATGATTTCACAACTTTTAGTTCCACAAACCAACGAGATGGTTGA 1134 0.3968 MMNGRNRYPFTPTQWQELEHQALIYKYMASGISIPPDLLLTIKRSYLDSSRLSPHQSQHFGWNYLPMGLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVEVLKTTTNTDAPVVSTSTILSITKNSNLDSDNTAPLTSTTHHDTSTYHYPQHSSSYASSSHLNHSFLYHNPPPSRPNFSFQDNSAPLFLDTTGSSSHTNNNTDCRNRYVYGLKEEVDEHAFFTEPSGTIRSLSASSMDDSWQLTPLTISSSPSFKQRNCSGLSNDNEYSYLQLQSLSDNNSKQPQQDQGCYISGSEETFMKHGKEEPQKIFHRFFDEWPPKSSRNSWLDLDDKSSTTQLSISIPTTSHDFTTFSSTNQRDG* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g5123 377 ProSiteProfiles WRC domain profile. 74 118 IPR014977 -
Mal5g5123 377 Pfam WRC 75 117 IPR014977 -
Mal5g5123 377 PANTHER GROWTH-REGULATING FACTOR 6 2 368 - -
Mal5g5123 377 Pfam QLQ 9 42 IPR014978 GO:0005524|GO:0005634|GO:0006355
Mal5g5123 377 PANTHER - 2 368 IPR031137 GO:0005634|GO:0006351|GO:0032502
Mal5g5123 377 ProSiteProfiles QLQ domain profile. 9 44 IPR014978 GO:0005524|GO:0005634|GO:0006355
Mal5g5123 377 SMART QLQ_2 8 44 IPR014978 GO:0005524|GO:0005634|GO:0006355
Mal5g5123 377 MobiDBLite consensus disorder prediction 141 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g5123 Mal-Chr5 125025165 125027138 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g5123 7 117 GRF Transcription Factor Family AT3G13960 71.053 8.38e-53 178
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Mal5g5123 WRC 8e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g5123 - - mtr:MTR_4g125490 698.353
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g5123 5 125025165 125027138 Mal5g5123 5 125025165 125027138 ECH