Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g5108 ATGAAAATCACGTGGAAATCGATATTTCCAAGTTGTTATAAGGCTGAAGGTGAATACACTTCACCCAAAGCAGCAACAAAAGAAACAGCAACAAAAGTTGTCGCTACAAAGACAAGTTCTTTTAACAGAATCTCTCTCACGGATCTGAGTTTTCCAAGTGCTACAACACTTTCTGCAGAAGATCTTTCTATTTCTCTAGCAGGGTCTAATCTCTATGTTTTTACACTAGCTGAGCTCAAGATTATTACTCAGAGTTTCTCTTCCAGTAATTTTCTTGGTGAAGGAGGGTTTGGACCTGTTCATAAAGGTTTCATTGATGATAAGGTTAGGTCTGGACTTGAACCTCAACCTGTGGCTATTAAGCGCTTAGATTTGGATGGTACTCAGGGTCATAGAGAATGGCTGACTGAGGTTGTGTTTCTTGGTCAACTGAGACATCAAAACCTTGTGAAGTTGATTGGATATTGCTGTGAAGAAGAACATAGACTCTTGGTATATGAGTATTTACCAAGAGGAAGCTTAGAGAATCAATTATTTAAAAGATATTCAGCATCATTACCATGGTCAACAAGAATGAAAATTGCTGTTGGAGCTGCAAAAGGTCTAGCCTTTTTACATGAAGCAAAGAAACCAGTCATCTATAGAGATTTCAAAGGTTCAAACATCTTATTAGACTCCGATTATAATGCAAAGCTCTCTGATTTTGGCTTGGCAAAAGATGGTCCTGAAGGTGATGACACACATGTTTCAACTAGAGTTATGGGCACTCAAGGTTATGCTGCACCAGAATATATCATGACAGGACATTTGACAGCAATGAGTGATGTTTATAGTTTTGGAGTTGTTCTCTTGGAGCTTCTAACTGGTAGAAGGTCCGTGGACAAGGTACGTCCACCAAGAGAACAGAATCTAGTGGAATGGGCTAGACCGGTTTTAAACGATGCTCGTAAACTTAGCAGAATAATGGATCCAAGGCTTGAAGGACAGTTTTCTGAGATGGGAGCAAGAAAAGCAGCTGCATTGGCTTATCAATGTTTAAGCCATAGGCCAAGGAATAGACCTACAATGTCTACTGTAGTTAACACTCTTGAACCTCTTAAGGATTTTGATGACATTCCAATTGGTCCTTTTGTTTACACGGTTCCAACTGATGTTAGTAACAATGAGGTGCAAAAAGAAAATTCTACTATTGAGACACCAAAGGAGAGGAAAAGGGAAAGTAGTACTAGTACTCATCATCGTAGAAATCAACATGTCAATAATGCCCCTAAACATATTGTTATTGATAATAACAACAATGAAGTGTTAGTACATAAAAAAGATGGAGAAGAATATTATTATGATACACCTAAGGAGAAAAAAAGGGAAAATGGTCATCGTCATAGAAGTCATAATCATCATCGCCACAATGGCCATAAGCATCCACTTAAATCACCAAAAACAAAATCATCAAATGAGGGACAACAAAGTGGGTCACATTCACACTCACCAGATAGTACCTCTATTACATCAGAAAGCCAAGGTAATTAA 1530 0.3817 MKITWKSIFPSCYKAEGEYTSPKAATKETATKVVATKTSSFNRISLTDLSFPSATTLSAEDLSISLAGSNLYVFTLAELKIITQSFSSSNFLGEGGFGPVHKGFIDDKVRSGLEPQPVAIKRLDLDGTQGHREWLTEVVFLGQLRHQNLVKLIGYCCEEEHRLLVYEYLPRGSLENQLFKRYSASLPWSTRMKIAVGAAKGLAFLHEAKKPVIYRDFKGSNILLDSDYNAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYIMTGHLTAMSDVYSFGVVLLELLTGRRSVDKVRPPREQNLVEWARPVLNDARKLSRIMDPRLEGQFSEMGARKAAALAYQCLSHRPRNRPTMSTVVNTLEPLKDFDDIPIGPFVYTVPTDVSNNEVQKENSTIETPKERKRESSTSTHHRRNQHVNNAPKHIVIDNNNNEVLVHKKDGEEYYYDTPKEKKRENGHRHRSHNHHRHNGHKHPLKSPKTKSSNEGQQSGSHSHSPDSTSITSESQGN* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g5108 509 MobiDBLite consensus disorder prediction 395 413 - -
Mal5g5108 509 Gene3D Transferase(Phosphotransferase) domain 1 169 372 - -
Mal5g5108 509 SUPERFAMILY Protein kinase-like (PK-like) 64 364 IPR011009 -
Mal5g5108 509 CDD STKc_IRAK 92 366 - -
Mal5g5108 509 MobiDBLite consensus disorder prediction 385 437 - -
Mal5g5108 509 Gene3D Phosphorylase Kinase; domain 1 48 168 - -
Mal5g5108 509 MobiDBLite consensus disorder prediction 456 478 - -
Mal5g5108 509 ProSitePatterns Serine/Threonine protein kinases active-site signature. 212 224 IPR008271 GO:0004672|GO:0006468
Mal5g5108 509 MobiDBLite consensus disorder prediction 450 509 - -
Mal5g5108 509 Pfam Protein tyrosine and serine/threonine kinase 90 363 IPR001245 GO:0004672|GO:0006468
Mal5g5108 509 ProSiteProfiles Protein kinase domain profile. 86 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g5108 509 MobiDBLite consensus disorder prediction 481 509 - -
Mal5g5108 509 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 30 422 - -
Mal5g5108 509 PANTHER OS01G0588500 PROTEIN-RELATED 30 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g5108 Mal-Chr5 124807760 124809954 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g5108 74 403 Glycoside Hydrolase AT3G07070 50.150 1.96e-102 311
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Mal5g5108 PK_Tyr_Ser-Thr 1.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g5108 - - mtr:MTR_4g125260 892.878
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g5108 5 124807760 124809954 Mal5g5108 5 124807760 124809954 ECH