Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g5103 ATGGGGTCTGAGTCACATACTCAAACTTTTACTGTCAAAGTCGTTAATCAGACAGAAGTTGAATGTGTGAAATGTGACTCATGTTGTCTTACAGAGGAATGCACACTTGCATACATCTCAAAAGTACGTCAGAGATACCAAGGAAGATGGCTTTGTGGGTTGTGTGTTGAAGCAGTGAAAGATGAAGTTGTTAGATCAAAGAGACTTATCAGCACTGAAGAAGCATTGAATCGACACATTAACTTCTATAGAGAGTTTAGATCATCATCAGCTGTTTTGAGTAAGATAGAGCCCCCTATTATGGTCATGAGTCGAATTCTTCTCCGAAGTTTGGATTCTCCTAGACCATCTCTTTGA 357 0.395 MGSESHTQTFTVKVVNQTEVECVKCDSCCLTEECTLAYISKVRQRYQGRWLCGLCVEAVKDEVVRSKRLISTEEALNRHINFYREFRSSSAVLSKIEPPIMVMSRILLRSLDSPRPSL* 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g5103 118 Pfam Protein of unknown function (DUF1677) 20 109 IPR012876 -
Mal5g5103 118 PANTHER DUF1677 FAMILY PROTEIN 3 115 - -
Mal5g5103 118 PANTHER OS01G0745000 PROTEIN 3 115 IPR012876 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g5103 Mal-Chr5 124756766 124757122 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g5103 - - mtr:MTR_4g125030 168.703
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g5103 5 124756766 124757122 Mal2g1001 2 11761424 11761855 ECH
Mal5g5103 5 124756766 124757122 Mal5g5103 5 124756766 124757122 ECH