Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g5096 ATGTCGACTTTATCCGACATTTCTGGTTTCTCCGGCAACAAACTACTATCAAATTCCTCAGAGAAACCTACGTTTTCTCAAACTTGTAACTTATTGAGCCAATACATCAAGGATAAGAAGGGTAGTTTTGAAGGCCTTAACCTTCAGAAGCCATGCACCCCTAAAACAAATGTTTCACCTGATTCATCTTGTCACTCTGGAATAACCATGGATTTATTTCCCACAAACGTCACACCAAGAAACTTTACAACTATGGATTTCTTCACTAAAGGAATTAATCACCCTCCTATGGTTAAGGAGTCTAAAACTGCACAATTTACAATGTTTTATGATGGACAAGTTTTTGTGTTGGATGATTTTCCTGCTGAGAAATTTGAGGTGATGAAATCAATTGCTGCAGCTCATGAGACTGACCCTAAATTGATTGATATGCCAATTGCTAGAAAAGCTTCACTTCTTCGATTCATGGAGAAAAGGAAAGACAGAGTTACTGCCAATGCACCATATGCAAGAATGAATCCTGACTCTGCACCAGAAAAGCCTTCTGAATCCATTCCTTGGCTTGAGTTAGGTGCTAAATCAACGTAA 588 0.3861 MSTLSDISGFSGNKLLSNSSEKPTFSQTCNLLSQYIKDKKGSFEGLNLQKPCTPKTNVSPDSSCHSGITMDLFPTNVTPRNFTTMDFFTKGINHPPMVKESKTAQFTMFYDGQVFVLDDFPAEKFEVMKSIAAAHETDPKLIDMPIARKASLLRFMEKRKDRVTANAPYARMNPDSAPEKPSESIPWLELGAKST* 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g5096 195 PANTHER PROTEIN TIFY 10A 20 133 - -
Mal5g5096 195 PANTHER PROTEIN TIFY 10A 138 191 - -
Mal5g5096 195 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 20 133 IPR040390 -
Mal5g5096 195 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 138 191 IPR040390 -
Mal5g5096 195 Pfam Jas motif 145 169 IPR018467 -
Mal5g5096 195 ProSiteProfiles Tify domain profile. 99 134 IPR010399 -
Mal5g5096 195 MobiDBLite consensus disorder prediction 166 195 - -
Mal5g5096 195 Pfam tify domain 101 124 IPR010399 -
Mal5g5096 195 SMART tify_2 99 134 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g5096 Mal-Chr5 124709016 124710719 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g5096 1 193 Tify Gene Family AT1G19180 32.941 3.72e-29 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Mal5g5096 Jas_motif 2.3e-13 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g5096 K13464 - gmx:100802800 182.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g5096 5 124709016 124710719 Mal5g5096 5 124709016 124710719 ECH
Mal5g5096 5 124709016 124710719 Mal4g2913 4 84459929 84460725 PCT