Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g5091 ATGGCGACTACTCAGCTTACCGCATCATCGATTTCTACGAGGAACCTTTCATCCTTTCAAACATTTTCTCCTAAGAATGCTAGAATTGGTATTCTCTCGCAGAGGTCGTTCCCGTCTATGCTTGTTAAAGCTGCCACTGTTGTTGCCCCCAAGCATACCACTGTCAAGCCACTAGGTGATAGAGTGCTGGTAAAAATTAAGGATGCAGAAGAGAAAACTCAGGGTGGAATTTTGCTGCCATCAACTGCTCAATCAAAGCCTCAAGGGGGTGAGGTGGTTGCTGTCGGTGAAGGGAAGTCAGTCGGGAAGAACAAAGTGGAAATTAGTGTGAAGGCAGGTGCACAAGTTGTGTATTCAAAGTATGCAGGGACTGAGGTGGAGTTCAATGGTTCAAAACATCTTATACTGAAGGATGATGACATCGTCGGTATTCTTGAAACCGAAGAGGTCAAGGATCTTAAACCCTTGAATGATAGAGTCTTGATAAAGGTTGCAGAAGCTGAGGAAAAAACTGCTGGTGGTTTGTTGCTTACGGAGGCAACCAAGGAGAAACCATCCATTGGCACTGTGATAGCAGTTGGTCCAGGGTCTGTGGATGATGAAGGCAACAGAAAACCATTAACCATTTCACCCGGAAATACAGTTCTGTACTCCAAATATGCAGGGAATGACTTCAAAGGCAAAGATGGTTCTGACTATATTGCTTTGAGAGCCTCAGATGTCATGGCTATCCTCTCTTAG 741 0.448 MATTQLTASSISTRNLSSFQTFSPKNARIGILSQRSFPSMLVKAATVVAPKHTTVKPLGDRVLVKIKDAEEKTQGGILLPSTAQSKPQGGEVVAVGEGKSVGKNKVEISVKAGAQVVYSKYAGTEVEFNGSKHLILKDDDIVGILETEEVKDLKPLNDRVLIKVAEAEEKTAGGLLLTEATKEKPSIGTVIAVGPGSVDDEGNRKPLTISPGNTVLYSKYAGNDFKGKDGSDYIALRASDVMAILS* 247
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mal5g5091 246 Hamap Co-chaperonin GroES [groES]. 152 246 IPR020818 GO:0005524|GO:0006457|GO:0140662
Mal5g5091 246 SUPERFAMILY GroES-like 152 245 IPR011032 -
Mal5g5091 246 ProSitePatterns Chaperonins cpn10 signature. 55 79 IPR018369 GO:0005524|GO:0006457
Mal5g5091 246 PANTHER 10 KDA HEAT SHOCK PROTEIN 1 246 IPR020818 GO:0005524|GO:0006457|GO:0140662
Mal5g5091 246 SMART Cpn10_2 152 245 IPR020818 GO:0005524|GO:0006457|GO:0140662
Mal5g5091 246 SMART Cpn10_2 54 145 IPR020818 GO:0005524|GO:0006457|GO:0140662
Mal5g5091 246 CDD cpn10 153 245 IPR020818 GO:0005524|GO:0006457|GO:0140662
Mal5g5091 246 Hamap Co-chaperonin GroES [groES]. 54 146 IPR020818 GO:0005524|GO:0006457|GO:0140662
Mal5g5091 246 Pfam Chaperonin 10 Kd subunit 55 144 IPR020818 GO:0005524|GO:0006457|GO:0140662
Mal5g5091 246 Pfam Chaperonin 10 Kd subunit 153 244 IPR020818 GO:0005524|GO:0006457|GO:0140662
Mal5g5091 246 PIRSF Cpn21 1 246 IPR017416 GO:0006457|GO:0046914|GO:1901671
Mal5g5091 246 Gene3D GroES chaperonin 48 147 IPR037124 GO:0006457
Mal5g5091 246 Gene3D GroES chaperonin 148 246 IPR037124 GO:0006457
Mal5g5091 246 PRINTS 10kDa chaperonin signature 111 123 IPR020818 GO:0005524|GO:0006457|GO:0140662
Mal5g5091 246 PRINTS 10kDa chaperonin signature 55 70 IPR020818 GO:0005524|GO:0006457|GO:0140662
Mal5g5091 246 PRINTS 10kDa chaperonin signature 132 145 IPR020818 GO:0005524|GO:0006457|GO:0140662
Mal5g5091 246 PRINTS 10kDa chaperonin signature 77 98 IPR020818 GO:0005524|GO:0006457|GO:0140662
Mal5g5091 246 PANTHER GROES CHAPERONIN 1 246 - -
Mal5g5091 246 SUPERFAMILY GroES-like 53 146 IPR011032 -
Mal5g5091 246 ProSitePatterns Chaperonins cpn10 signature. 153 177 IPR018369 GO:0005524|GO:0006457
Mal5g5091 246 CDD cpn10 54 145 IPR020818 GO:0005524|GO:0006457|GO:0140662
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Mal5g5091 Mal-Chr5 124657026 124659372 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g5091 1 246 Calmodulin-binding Proteins AT5G20720 74.308 3.45e-132 371
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g5091 K04078 - gmx:100804915 402.905
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g5091 5 124657026 124659372 Mal5g5091 5 124657026 124659372 ECH
Mal5g5091 5 124657026 124659372 Mal4g2900 4 84034992 84037599 PCT