Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g5087 ATGATGCAAACACATATCTCCCTCACACTCTTTGTTTTCTTGTTTCATTCATCCGCAACCGCGGCGAAACCACCGCAAGATCTAATCCGTTCATCATGCGCACAAGCTAGATACCCAACACTCTGCGTCCAAACACTCTCCAACCAAGTAGGTCCCACAAAAAACCCATTAGACCTAGCTCAAGCCTCCGTCAAAGCCAGTCTCACTCGCACTCTCACCCTTTCCGTTTACCTCAAAAACACCCTAAAGTCCAACGTGGCAGTGGGGTCCACAACCACCGCCAGAACTCGAGTTGCATTGAGTGATTGCGTTGCACAGATTTCTGACTCAGTTGCTGAGTTAAACCGATCGTTGAACGAGTTAAAACATCTTCGTATGGGAACGTTTGAGTGGCAAATGAGTAACGCTCAAACTTGGGCTAGCACTGCTTTTACTAACGGTAACTCTTGTATTAACGGTGTGAATAGGAGTGACGCTGAAAAGAAGGTGAAGTTGGAGGTGAAACAAAGAGTTAACGATGCATCTATGTTTATTAGTAATGCTCTCTACTTAATCAATCGTCTCGGTGAAAGTAGGAATCAAAAGCCTCACTCCAATTCCAATAACTGA 609 0.4499 MMQTHISLTLFVFLFHSSATAAKPPQDLIRSSCAQARYPTLCVQTLSNQVGPTKNPLDLAQASVKASLTRTLTLSVYLKNTLKSNVAVGSTTTARTRVALSDCVAQISDSVAELNRSLNELKHLRMGTFEWQMSNAQTWASTAFTNGNSCINGVNRSDAEKKVKLEVKQRVNDASMFISNALYLINRLGESRNQKPHSNSNN* 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g5087 202 TIGRFAM PME_inhib: pectinesterase inhibitor domain 4 188 IPR006501 GO:0004857
Mal5g5087 202 Coils Coil 104 124 - -
Mal5g5087 202 Pfam Plant invertase/pectin methylesterase inhibitor 27 183 IPR006501 GO:0004857
Mal5g5087 202 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR 13 197 - -
Mal5g5087 202 CDD PMEI-like_3 31 188 - -
Mal5g5087 202 SMART PMEI_2 24 184 IPR006501 GO:0004857
Mal5g5087 202 Gene3D Invertase/pectin methylesterase inhibitor family protein 25 189 IPR035513 -
Mal5g5087 202 PANTHER PECTINESTERASE INHIBITOR-LIKE 13 197 - -
Mal5g5087 202 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 26 188 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g5087 Mal-Chr5 124587635 124588243 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g5087 28 202 Carbohydrate Esterase AT3G14310 28.177 8.78e-14 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g5087 - - mtr:MTR_4g124855 338.576
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g5087 5 124587635 124588243 Mal5g5087 5 124587635 124588243 ECH