Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g5081 ATGGACGAAGCCGGAGTTTCCAAATTAACTGCTAAATTGAAGGAAATATTTCAAAAGTGGCAACTGGGTTATAAAGAAGGCAATGACCAATCTGGTGTGATGAATCATGGAGGCATATCACCAATGATCAATAAAAGGTTAAACAGTTTAGTGTACTGTGATTCTGATGAAGACAGTTGCAACAGTCCGAAAGCGCCGCATGATGTTCCCAAAGGGTACTTAGCTGTCTATGTTGGGCCAGAGCTTAGGAGGTTCATCATTCCTACAAGCTACCTTAGTCACTCTCTTTTCAAAATGTTGTTGGAAAAAGCTGCTGATGAATTTGGTTTTAATCAATGTGGTGGACTTACAATTCCATGTGAAATTGAAACTTTTAAATACCTTCTCAGCTGTATGGAGAATACTCAGCTTCATCATGATGACACCTCCTCTGGAAACACAGGAACTGTGGAAGAGAGAATAAAATAA 468 0.3932 MDEAGVSKLTAKLKEIFQKWQLGYKEGNDQSGVMNHGGISPMINKRLNSLVYCDSDEDSCNSPKAPHDVPKGYLAVYVGPELRRFIIPTSYLSHSLFKMLLEKAADEFGFNQCGGLTIPCEIETFKYLLSCMENTQLHHDDTSSGNTGTVEERIK* 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g5081 155 Pfam Auxin responsive protein 55 131 IPR003676 GO:0009733
Mal5g5081 155 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 5 151 IPR003676 GO:0009733
Mal5g5081 155 PANTHER SMALL AUXIN-UP RNA-RELATED 5 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g5081 Mal-Chr5 124532674 124533574 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g5081 1 152 Calmodulin-binding Proteins AT3G43120 59.259 5.19e-60 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g5081 K14488 - gmx:100795275 230.335
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g5081 5 124532674 124533574 Mal5g5081 5 124532674 124533574 ECH
Mal5g5081 5 124532674 124533574 Mal4g2866 4 82460094 82460875 PCT