Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g5079 ATGAAAATGGGTCACGTTGAAACTGGAGCGAAATTATTGGCTACACTAGCACTTGCTCTCTTCCACCTTGTTCCAGTAACCCCTACATTGTCCGAATTCAACCGTCACCGTGAGATTACCTTGTTAGATGAACACTTAACTGCTGCGGAAGACGACGTTAGAGTGGTGAGAGTTCGGAAAGATGGAACCGGAGATTTTACGACGGTGACGGACGCCGTTAAAAGCATTCCACCGGGGAACAATCGGCGAGTGGTGGTGTGGATTGGTATGGGAGAGTATAGAGAGAAAATAACGGTTGATAAATCGAAACGTTTTGTAACGTTTTATGGGGAAAGGAATGGGAATGACAATGACATTATGCCCATTATAACGTACGACGGAACCGCTTTGCATTATGGGACACTTGATAGTGCAACTGTCGCTGTTGATGCTGACTACTTTGTTGCTGTCAATGTGGCATTTGTGAACTCGTCTCCAATGCCGGACGAAAAAAGTGTAGGAGGACAAGCATTAGCGATGAGGATATCAGGGGATAAGGCTGCATTCTACAACTGCAAGTTCATCGGATTTCAAGATACCTTGTGTGATGACTATGGCAAACATTTTTTCAAGGACTGCTTTATTCAAGGAACCTATGATTTCATCTTCGGAAATGGAAAATCCATCTACTTGAGAACTACTATAGTATCGGTTGCAAAGGGTTTGAATGTTATCACAGCACAAGGTAGGGAAAACATGTCAGTAGACACTGGATTCACATTTGTGCATTGCAACATAACTGGAACTGGTCACATGAACACTTACCTTGGTCGTGCTTGGAGGAGGAGCCCTAGGGTGGTATTTGCCTATACTTATATGGACTCTGTCGTCAATTCCAAAGGATGGTACCACCATGGATCCAATGAGACAATCTATTTTGGAGAATACAAGTGCAGTGGACCAGGTGCTGGCAGGTTAACATATGAAAGGATATTATCTGATGATGAAGCAAGACCCTTCTTGAGCATGGCTTATATTCATGGAGAACAGTGGGTTCGCCCACCTCCCAAACTTTGA 1056 0.4394 MKMGHVETGAKLLATLALALFHLVPVTPTLSEFNRHREITLLDEHLTAAEDDVRVVRVRKDGTGDFTTVTDAVKSIPPGNNRRVVVWIGMGEYREKITVDKSKRFVTFYGERNGNDNDIMPIITYDGTALHYGTLDSATVAVDADYFVAVNVAFVNSSPMPDEKSVGGQALAMRISGDKAAFYNCKFIGFQDTLCDDYGKHFFKDCFIQGTYDFIFGNGKSIYLRTTIVSVAKGLNVITAQGRENMSVDTGFTFVHCNITGTGHMNTYLGRAWRRSPRVVFAYTYMDSVVNSKGWYHHGSNETIYFGEYKCSGPGAGRLTYERILSDDEARPFLSMAYIHGEQWVRPPPKL* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g5079 351 Gene3D - 52 348 IPR012334 -
Mal5g5079 351 Pfam Pectinesterase 56 341 IPR000070 GO:0030599|GO:0042545
Mal5g5079 351 PANTHER PECTINESTERASE 31 350 - -
Mal5g5079 351 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 31 350 - -
Mal5g5079 351 SUPERFAMILY Pectin lyase-like 55 347 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g5079 Mal-Chr5 124520673 124522889 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g5079 42 351 Carbohydrate Esterase AT5G07410 51.899 1.63e-118 345
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g5079 K01051 - gmx:100790786 509.605
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g5079 5 124520673 124522889 Mal5g5079 5 124520673 124522889 ECH