Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g5072 ATGGGAAGAGAAGCTGCAGCAAAGCCGGTACAACAACAAGGACAAGGAGGAACTGCTTATACCGTCGAGCAGCTCGTTGCATTCAATCGTTACAATCCCGATATTCTTCCAGATCTCGAAAACTATGTCAATGACCAGGTTTCATCACAGACTTACAGCCTCGAATCAAATCTCTGCCTTCTTCGTCTCTACCAGTTTGAACCTGAGAAAATGAGTTCTCAGATTGTAGCTCGCATTTTGGTTAAGGCTCTCATGGCCATGCCGGCTCCAGACTTCAGCCTGTGTCTCTTTTTGATTCCGGAACGTGTGCAAATGGAGGAGCAGTTCAAGACACTGATTGTTCTGTCTCACTATTTAGAGACTGGAAGGTTTCGTCAGTTCTGGGATGAAGCATCGAAAAGTCGTCATATAGTTGAAGCTGTGCCAGGATTTGAGCAGGCAATCCAAGGCTATGCAATTCATGTCCTATCCTTGACTTACCAAAAGATTCCTAGAACTGTACTTGCTGAGGCTATCAACATAGAAGGTTTATCCTTGGACAAATTCCTTGAACACCAAGTAGCCAGCTCTGGTTGGGTTATTGAGAAAAGCCAGGGGAAGGGTCAACTCATTGTCCTTCCCAGAAATGAATTTAATGATCCAATTTTGAAGAAAAACACTGCAGATAGTGTACCATTGGAGCACATTACCCGCATCTTTCCTATTCTTAGCTGA 714 0.4412 MGREAAAKPVQQQGQGGTAYTVEQLVAFNRYNPDILPDLENYVNDQVSSQTYSLESNLCLLRLYQFEPEKMSSQIVARILVKALMAMPAPDFSLCLFLIPERVQMEEQFKTLIVLSHYLETGRFRQFWDEASKSRHIVEAVPGFEQAIQGYAIHVLSLTYQKIPRTVLAEAINIEGLSLDKFLEHQVASSGWVIEKSQGKGQLIVLPRNEFNDPILKKNTADSVPLEHITRIFPILS* 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g5072 237 Hamap Eukaryotic translation initiation factor 3 subunit K [EIF3K]. 13 237 IPR009374 GO:0003743|GO:0005737|GO:0005852
Mal5g5072 237 Pfam CSN8/PSMD8/EIF3K family 72 198 IPR033464 -
Mal5g5072 237 ProSiteProfiles PCI domain profile. 52 211 IPR000717 -
Mal5g5072 237 SUPERFAMILY ARM repeat 19 140 IPR016024 -
Mal5g5072 237 Gene3D ARM repeat; domain 1 18 130 IPR016020 GO:0003743|GO:0005852|GO:0006446|GO:0043022
Mal5g5072 237 Gene3D - 133 236 IPR036388 -
Mal5g5072 237 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT K 18 236 - -
Mal5g5072 237 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 11 18 236 IPR009374 GO:0003743|GO:0005737|GO:0005852
Mal5g5072 237 SUPERFAMILY "Winged helix" DNA-binding domain 142 234 IPR036390 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g5072 12 237 Eukaryotic Initiation Factors Gene Family AT4G33250 76.106 2.65e-128 360
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g5072 K15028 - gmx:100306445 417.157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g5072 5 124388457 124390938 Mal5g5072 5 124388457 124390938 ECH