Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g5062 ATGGCGTTTCAAGATTTTGACCTCATCACAGAACGACGAAAAAGCGAGAAGAGACAACAAATTAAGAAAAGAATCATCATCGGCGTTGTTTCAACTGTTGTCTTGGTCGGTCTCATAGGTTGTGCATTCTTTGTTGCCACCACAAAATACAGCCCTTTTGGTGGTGGTAGCCGTACAACCCAAGACTCTTCAACTTCTAATGGTAACAAACATGTTGCACATTCAGAAAAGATAGTGAAATTGGTATGCAGTTCTGCAGATTACAAAGAAAAATGTGAAGGACCTCTTACCAAAGCAGTGAAAGAGGATCCTAAACTTGAACACCCTAAAGACCTTCTCAAAGTCTATCTTAAAACTGTACAAGAAGAGGTTCACAAAGCCTTCAACAAAACAAGCTCATTCAAATTTGATACTGAAGAAGAGAAAGGTGCATTTGAGGATTGTAAAGGGCTTATTAAATATGCTAAGGATGATTTAGCTACCTCTATTGATCAACTTAGTGAAGTTGAATTGAATAAACTTTCTTCAAAAACACCTGACTTGAACAGTTGGTTGAGTGCTGTTATCTCTTTCCAACAAACTTGTGTTGATGGTTTTCCTGAGGGAAAATTGAAGACGGATCTTCAGAAATTGTTTCAGGGTTCTAGGGAATTTGTTAGCAATTCTCTTGCTATTGTGTCTCAGCTTTCTACATTCATTTCTACGTTTAAGACAATTGCTGGCCCCCGTATGTTGTTGTCTGATAACTCTCCTGTTGCTTCTATGGATCATGAAGGTTTTCCTTCATGGATTCATTCTGATGAGAGAAGGGTGTTGAAGGCTGCTGATATTAGACCTACACCTAATGTCATTGTTGCTCAAGATGGCAGTGGTGAGTTCAAAACCATCTCTGCAGCTTTGGCCGCCATGCCTAAAGCCTACCGTGGAAGGTATGTGATTTATGTTAAAGAAGGAGTATACGATGAGACAGTGACAGTAACAGATAAAATGGAAAATGTAACCATGTACGGTGATGGATCACAGAAGAGCATTATCACTGGTAACAAAAACTTTAGGGATGGAGTCAGGACCTTCCAAACCGCAAGTTTTGTGGTGCTAGGAAATGGATTTTTGGGTCTAGCAATGGGATTCAGAAACACAGCTGGTCCTGATGGACATCAAGCAGTGGCAGCTAGAGTCCAAGCAGACCGTGCCGTGTTTGCCAACTGTCGTTTCGAAGGCTACCAAGATACACTATACACACAAACACATAGACAATTCTACCGTAGCTGCATCATAACAGGAACAATCGATTTCATCTTCGGTGACGCAGCCGTTATATTCCAAAACTGCATCATGGTTGTTAGAAAACCAAATGACAACCAAATGAATGCGGTGACAGCACAAGGAAGACTTGACAAAAAACAAGCAACAGCAATTGTTCTACATAAATGTACAATTAAAGCTGATGAGAAATTGATTCCTGTTAAAAACCAAATAAAAAGTTACCTTGGTAGACCTTGGAAGGAATTTGCAAGAACAATTGTTATGGAAACTGAAATTGGTGATTTTATTCACCCTGATGGATGGGCACCTTGGAATGGAAACTTTGCTTTGAGTACATTGTATTATGCTGAGTATGGTAACACTGGACCTGGTGCTAGTACTAGTGCTAGAGTTAAGTGGCCTACTTTCAAAGTTATTAACAAAGCAGAAGCTAGCAAGTGGACTGTAACAAGTTTCTTGCCAGGTAACTGGGTTCAAACCTCAGGTGTACCTTCTCAGCCAGGATTGTACAGTTGA 1782 0.4018 MAFQDFDLITERRKSEKRQQIKKRIIIGVVSTVVLVGLIGCAFFVATTKYSPFGGGSRTTQDSSTSNGNKHVAHSEKIVKLVCSSADYKEKCEGPLTKAVKEDPKLEHPKDLLKVYLKTVQEEVHKAFNKTSSFKFDTEEEKGAFEDCKGLIKYAKDDLATSIDQLSEVELNKLSSKTPDLNSWLSAVISFQQTCVDGFPEGKLKTDLQKLFQGSREFVSNSLAIVSQLSTFISTFKTIAGPRMLLSDNSPVASMDHEGFPSWIHSDERRVLKAADIRPTPNVIVAQDGSGEFKTISAALAAMPKAYRGRYVIYVKEGVYDETVTVTDKMENVTMYGDGSQKSIITGNKNFRDGVRTFQTASFVVLGNGFLGLAMGFRNTAGPDGHQAVAARVQADRAVFANCRFEGYQDTLYTQTHRQFYRSCIITGTIDFIFGDAAVIFQNCIMVVRKPNDNQMNAVTAQGRLDKKQATAIVLHKCTIKADEKLIPVKNQIKSYLGRPWKEFARTIVMETEIGDFIHPDGWAPWNGNFALSTLYYAEYGNTGPGASTSARVKWPTFKVINKAEASKWTVTSFLPGNWVQTSGVPSQPGLYS* 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g5062 593 CDD PMEI-like_3 81 231 - -
Mal5g5062 593 TIGRFAM PME_inhib: pectinesterase inhibitor domain 70 229 IPR006501 GO:0004857
Mal5g5062 593 Pfam Pectinesterase 282 577 IPR000070 GO:0030599|GO:0042545
Mal5g5062 593 PANTHER PECTINESTERASE 14 591 - -
Mal5g5062 593 SMART PMEI_2 74 225 IPR006501 GO:0004857
Mal5g5062 593 Pfam Plant invertase/pectin methylesterase inhibitor 78 225 IPR006501 GO:0004857
Mal5g5062 593 Gene3D Invertase/pectin methylesterase inhibitor family protein 75 231 IPR035513 -
Mal5g5062 593 Gene3D - 277 591 IPR012334 -
Mal5g5062 593 SUPERFAMILY Pectin lyase-like 279 580 IPR011050 -
Mal5g5062 593 PANTHER PECTINESTERASE 14 591 - -
Mal5g5062 593 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 77 230 IPR035513 -
Mal5g5062 593 ProSitePatterns Pectinesterase signature 2. 426 435 IPR033131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g5062 Mal-Chr5 124297410 124299601 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g5062 1 592 Carbohydrate Esterase AT4G33230 49.180 0.0 590
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g5062 5 124297410 124299601 Mal5g5062 5 124297410 124299601 ECH
Mal5g5062 5 124297410 124299601 Mal4g2829 4 81354166 81357799 PCT