Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g5058 ATGGCACTCTGTTCCACAAAACAACCATCCACAACAACAATCTCATTAACCACATTCATCTTCTTCTTCCTCCTAATCTCTCTACCACAGTACTCCACATCTGCTTCTTCTCCCAATGACTTTGTTGGTTCAGTCTCCCTCAGAGTTTCTCCCACCAAATTTGCCAACTCTGCCGAAGAAGTTATCACCGTTTTACAAAAAGTCATTTCCATCTTATCACGCTTCACCAACGTCTTCGGTCACTCTCGTACCTCAAACGCCATTTCTGATTGCCTCGATTTACTCGACATGTCTTTAGACCAACTTAACCAGGCCATTTCCGCCTCTCAAAATCCCAATGGGAAGGATAATAGTACTGGAAATCTAAGCTGTGATCTAAAAACATGGCTGAGTGCTGTTCTTGTGAATCCAGACACATGTATAGAAGGATTAGAAGGTTCAATTGTAAAGGGTCTTGTATCCTCCGGTCTCGATCATGTAATGTCCTTGGTGGCCGATCTTCTTGGTCAAGTAGTTTCCGGCAATGATCAACTCGCAACAGCAACAAAAGAGGATCGATTTCCTTCGTGGATCAAAGACAATGACAAGAAGCTTTTGCAGGCTCATGCAGTGACTTCTGCTGATGCTGTTGTGGCCACTGATGGAAGTGGAGACTACACTAAGGTGATGGATGCCATATCGGCAGCACCTGAAAACAGCATGAAAAGATATGTTATATATGTAAAAAAAGGTGTATATGTTGAGAATGTTGAGATTAAGAAGAAGAAATGGAATATTATGATGATTGGTGAAGGCATGGATGCTACTGTTATCTCCGGTAGTCGGAATTATGTCGATGGTTCGACAACTTTCCGGTCAGCTACCTTTGCTGTAAGTGGTAGAGGGTTCATAGCTCGCGACATTTCATTTCAGAACACCGCAGGACCTGAGAAGCACCAAGCAGTGGCGTTAAGATCAGACTCTGACCTCTCGGTATTTTACCGGTGTGGGATATTTGGTTATCAAGATAGCCTATATACTCACACCATGCGTCAATTCTACCGCGAATGCAAAATTAGCGGTACAGTGGATTTTATCTTTGGAGACGCTACAGCCTTGTTCCAAAACTGTCAAATACTAGCCAAGAAAGGGATGCCTAAACAAAAGAACACTGTTACCGCTCAAGGACGAAAAGACCCAAACCAACCAACCGGTTTCTCCTTCCAATTTTGCAACATTTCCGCAGATTCTGACCTTCTACCATCGGTCGAAACCATCCCAACATACCTTGGTAGACCCTGGAAGACTTATTCGCGAACAATTTTTATGCAATCCTACATGAGTGACGCGATAAGGCCAGAAGGGTGGTTAGAGTGGAACGGAGATTTTGCTTTGAACACATTGTACTATGGTGAATACATGAATTCTGGACCGGGTGCTGGGGTAGCTAATCGGGTGAAATGGTCAGGATATCATGTATTGAATGATTCGAGCGAGGCTACTAAATTCACTGTGGCTAAATTTATTGAGGGGAATCTTTGGTTACCTTCCACTGGTGTAACTTACACTTCTGGTTTGAAAGTGTAA 1566 0.433 MALCSTKQPSTTTISLTTFIFFFLLISLPQYSTSASSPNDFVGSVSLRVSPTKFANSAEEVITVLQKVISILSRFTNVFGHSRTSNAISDCLDLLDMSLDQLNQAISASQNPNGKDNSTGNLSCDLKTWLSAVLVNPDTCIEGLEGSIVKGLVSSGLDHVMSLVADLLGQVVSGNDQLATATKEDRFPSWIKDNDKKLLQAHAVTSADAVVATDGSGDYTKVMDAISAAPENSMKRYVIYVKKGVYVENVEIKKKKWNIMMIGEGMDATVISGSRNYVDGSTTFRSATFAVSGRGFIARDISFQNTAGPEKHQAVALRSDSDLSVFYRCGIFGYQDSLYTHTMRQFYRECKISGTVDFIFGDATALFQNCQILAKKGMPKQKNTVTAQGRKDPNQPTGFSFQFCNISADSDLLPSVETIPTYLGRPWKTYSRTIFMQSYMSDAIRPEGWLEWNGDFALNTLYYGEYMNSGPGAGVANRVKWSGYHVLNDSSEATKFTVAKFIEGNLWLPSTGVTYTSGLKV* 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g5058 521 Gene3D Invertase/pectin methylesterase inhibitor family protein 27 172 IPR035513 -
Mal5g5058 521 SUPERFAMILY Pectin lyase-like 203 518 IPR011050 -
Mal5g5058 521 ProSitePatterns Pectinesterase signature 2. 352 361 IPR033131 -
Mal5g5058 521 ProSitePatterns Pectinesterase signature 1. 233 252 IPR018040 -
Mal5g5058 521 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 44-RELATED 50 519 - -
Mal5g5058 521 PANTHER PECTINESTERASE 50 519 - -
Mal5g5058 521 SMART PMEI_2 33 170 IPR006501 GO:0004857
Mal5g5058 521 Pfam Pectinesterase 208 505 IPR000070 GO:0030599|GO:0042545
Mal5g5058 521 CDD PMEI-like_4 16 175 - -
Mal5g5058 521 Pfam Plant invertase/pectin methylesterase inhibitor 44 160 IPR006501 GO:0004857
Mal5g5058 521 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 62 164 IPR035513 -
Mal5g5058 521 Gene3D - 205 521 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g5058 Mal-Chr5 124260370 124263060 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g5058 19 519 Carbohydrate Esterase AT3G43270 61.673 0.0 678
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g5058 K01051 - gmx:100812756 716.457