Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g5056 ATGTATCATCAACACACTTTTGTTGATATTCAGAATGACAAGCCTGAGATCATTGTTAAGTATAAGGGTGAGGAAAAGCACTTTTGTGCTGAGGAAATCTCATCAATGGTTCTCAGGAGGATGCGCGAGATTGCAGTGAAATTTTTGGAGTCCCCTGTTGAGAATGCAGTTGTTACTGTACCGGCTTATTTCAATGATTCTCAACGAAAAGCCACAAAAGATGCTGGTGCAATTGCCGGCCTCAATGTAATGCGGATAATTAATGAACCAACTGCGGCTGCCCTTGCATATGGCCTTCAAAAGAGAGCAAATGATATTGGAGAACGAAATGTGTTCATCTTTGATCTTGGTGGTGGCACTTTCGATGTGTCTCTTCTCACACTCAAAGATGGTAGCTTTAATGTAAAAGCCACTGCCGGAGATACTCACCTAGGAGGAGAGGACTTTGATAGCAGATTGTTGAACCATTTAGTGACGGAGTTTAAGAGGAAGAACAGGGTGGACATTGGTGGGAACCCGAGGGCCATTACGAGGTTGAGAAATGCCTGA 549 0.4353 MYHQHTFVDIQNDKPEIIVKYKGEEKHFCAEEISSMVLRRMREIAVKFLESPVENAVVTVPAYFNDSQRKATKDAGAIAGLNVMRIINEPTAAALAYGLQKRANDIGERNVFIFDLGGGTFDVSLLTLKDGSFNVKATAGDTHLGGEDFDSRLLNHLVTEFKRKNRVDIGGNPRAITRLRNA* 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g5056 182 PRINTS 70kDa heat shock protein signature 119 129 - -
Mal5g5056 182 PRINTS 70kDa heat shock protein signature 56 76 - -
Mal5g5056 182 SUPERFAMILY Actin-like ATPase domain 5 101 IPR043129 -
Mal5g5056 182 Pfam Hsp70 protein 7 182 IPR013126 GO:0005524|GO:0140662
Mal5g5056 182 Gene3D - 37 101 - -
Mal5g5056 182 Gene3D - 8 36 - -
Mal5g5056 182 PANTHER HEAT SHOCK 70 KDA PROTEIN 11 182 - -
Mal5g5056 182 Gene3D - 102 144 - -
Mal5g5056 182 Gene3D Actin; Chain A, domain 4 145 182 - -
Mal5g5056 182 PANTHER HEAT SHOCK PROTEIN 70KDA 11 182 IPR013126 GO:0005524|GO:0140662
Mal5g5056 182 ProSitePatterns Heat shock hsp70 proteins family signature 2. 113 126 IPR018181 -
Mal5g5056 182 SUPERFAMILY Actin-like ATPase domain 108 181 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g5056 Mal-Chr5 124207873 124208421 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g5056 13 182 Calmodulin-binding Proteins AT3G12580 76.471 1.34e-89 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g5056 K03283 - sspl:121764773 267.7