Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g5050 ATGGGTTTCTACACTCAACAATCCATCTCCAATTTAACAATAAGCCAAGCCATATATGAAGCAGCTCTAATCATTGCAGTTCTTAGATGGATCATATGCTTAGTTTTCAAAATAATCAAACACACAAGAACAAAACATGAACAACAACAACACTCTTCTTGTTGTCAAATGTTACCTTTGACCAGTTTCGGAGAAATCAAGGAAAGACATCCAGAAACAGAAGAAACATGTGCTGTTTGTTTGAACAAACTGAAAATGGAAGATGAAGTTAGAGAATTGATGAACTGTGATCATGTGTTTCATAAGGAATGCATAGACAAGTGGTTAGAACATGGTCATGAGAATGAAAATCATAACCAAACTTGTCCACTTTGTAGAGCTCCTTTGATTAATTCTTATTCACTTTCATCTGAGATTTCAAGTTGTGGATTTTCTTCTCCTCAACCTAGTTGGGCTGTTGAGAGACTTCTTTATCTCTTTGGTGATGATCTTTTGCCTTGTTAA 504 0.3532 MGFYTQQSISNLTISQAIYEAALIIAVLRWIICLVFKIIKHTRTKHEQQQHSSCCQMLPLTSFGEIKERHPETEETCAVCLNKLKMEDEVRELMNCDHVFHKECIDKWLEHGHENENHNQTCPLCRAPLINSYSLSSEISSCGFSSPQPSWAVERLLYLFGDDLLPC* 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g5050 167 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 1 166 - -
Mal5g5050 167 ProSiteProfiles Zinc finger RING-type profile. 77 126 IPR001841 -
Mal5g5050 167 PANTHER RING ZINC FINGER PROTEIN-RELATED 1 166 - -
Mal5g5050 167 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 61 141 IPR013083 -
Mal5g5050 167 Pfam Ring finger domain 76 126 IPR001841 -
Mal5g5050 167 SMART ring_2 77 125 IPR001841 -
Mal5g5050 167 SUPERFAMILY RING/U-box 70 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g5050 Mal-Chr5 124158656 124159159 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g5050 1 166 C3H Transcription Factor Family AT3G43430 41.808 8.64e-42 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g5050 K16281 - mtr:MTR_4g124390 238.424
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g5050 5 124158656 124159159 Mal5g5050 5 124158656 124159159 ECH