Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g5036 ATGAAGCTGCTATGTGTGTTTGGGTTCATAGGCTTTGTGATTGTGAAAGGGGTGGAGCTGGAAAGTTTTGAGAATGGTAATGTGACAGACATGCTATATGGCAGAGGAAGAGGTTTCTACAATAGACCTTTGATGGTTGGTCTTACTCTTATTAATGGAGCTGCTGCTAAAGGAGCTGTCTGCCTTGATGGATCTTTACCGGCTTACCACTTCCACCGTGGATACGGTTCAGGATCAAACAGTTGGCTAATACATTTGGAGGGAGGAGGCTGGTGTGGAACTATAAGAAATTGTATTTACAGTAAGAAAACGCGTCATGGTTCATCATATTTTATGGAAAAACAAATACCATTTATTGGAATATTGAGCAACAAAGCTGAGGAAAATCCAGATTTTTTCAATTGGAATAGAGTAAAAATTCGTTATTGTGATGGCGCGTCGTTTAGTGGGGACAGTCAAAATGAGGCAGCAAGGTTGTATTTCAGAGGACAACGCATCTGGCAAGCTGCTATGGAAGATTTAATGTCAAAAGGGATGCGATATGCCAAACAGGCTCTTCTATCTGGATGTTCTGCAGGAGGTTTATCAGCTGTACTACATTGCGATGAATTTCGGGAATTGTTTCCTAGAACAACTAGAGTAAAGTGCTTTAGTGACGCCGGATTATTCCTTGACTCTATTGATGTATCTGGCCGTCGCAGTTTAAGGAATTTGTTTGGCAGTGTAGTCACTTTACAGGGTGTACAGAAGAGCCTTCCAAGGAGTTGTACCAATCACCTCAATCCAATTTTGTGCTTTTTCCCTCAGCATTTAATTGCAAGTGTAAGGACGCCACTATTTATCCTCAATGCAGCTTATGATACTTGGCAGATTCAAGCCAGTCTAGCTCCACCATCTGCTGACTATCATTGGAATTGGTATGAATGCCGAAAAAATTATGCACGTTGTAGTTCACCACAGATACAATATCTGCAAGGTTTTCGAAATCAGATGCTTAGAGTTACAAGACGCTTCTCAAGGTCGCGCCAAAACGGATTATTCATTAATTCATGCTTCGCTCATTGCCAATCTGAAAGACAGGATACATGGTTTGCTCGCGGTTCTCCTCATATTGGAAATAAAGGGATCGCAGATTCTGTTGGGAACTGGTTTTTTGACCGAGTTGGTGTCAAAGCTGTCGGGTGTGCTTACCCTTGTGACAAAACATGCCATAATTTGGTTTTCAACTGA 1230 0.4171 MKLLCVFGFIGFVIVKGVELESFENGNVTDMLYGRGRGFYNRPLMVGLTLINGAAAKGAVCLDGSLPAYHFHRGYGSGSNSWLIHLEGGGWCGTIRNCIYSKKTRHGSSYFMEKQIPFIGILSNKAEENPDFFNWNRVKIRYCDGASFSGDSQNEAARLYFRGQRIWQAAMEDLMSKGMRYAKQALLSGCSAGGLSAVLHCDEFRELFPRTTRVKCFSDAGLFLDSIDVSGRRSLRNLFGSVVTLQGVQKSLPRSCTNHLNPILCFFPQHLIASVRTPLFILNAAYDTWQIQASLAPPSADYHWNWYECRKNYARCSSPQIQYLQGFRNQMLRVTRRFSRSRQNGLFINSCFAHCQSERQDTWFARGSPHIGNKGIADSVGNWFFDRVGVKAVGCAYPCDKTCHNLVFN* 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g5036 409 PANTHER NOTUM-RELATED 8 408 IPR004963 GO:0016787
Mal5g5036 409 Pfam Pectinacetylesterase 43 387 IPR004963 GO:0016787
Mal5g5036 409 PANTHER PECTIN ACETYLESTERASE 8 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g5036 Mal-Chr5 123989697 123994431 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g5036 19 408 Carbohydrate Esterase AT1G57590 66.752 0.0 558
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g5036 K19882 - gmx:100791571 748.429
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g5036 5 123989697 123994431 Mal5g5036 5 123989697 123994431 ECH
Mal5g5036 5 123989697 123994431 Mal1g1560 1 20398082 20401738 ECH
Mal5g5036 5 123989697 123994431 Mal3g4798 3 127965376 127969306 ECH