Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g5030 ATGGCCATGCAGCAACAATCTTCATCACCTAAAATCAAGAAACAAATAATATTAGAGGATGATAGAGCTGCATCTGAATTTGCTTCTTGCAGGAAAGTTAGAGTGTCCATTAGGGCAAGATCAGATTTCTCATTGATGAGTGATGGGTGTCGATGGAGAAAGTATGGACAAAAGATATCAAAGGTTAACCCCTACTGTCCCCGGGCCTACTATCGTTGCAATATGGGATTGGGAACAATACCATGTCCAGTTCGTAAGCAGGTTCAAAGGTGTTGTGTAGATGAGACAGTTTTCATCACAACATATGAGGGAAATCATAATCATTCACTTCCACCAGCAGCTAGGTTGACAGCAAGCACAACATCAGCAGCATTGAGCATGTTTCTATCTGGTTCAACCACTAGTTTACATGGAAGCACCACTCTCTCAAATGCAGGCCTCTTCTCCTCCTCCTCCTCCTCTGCCTCCACTGGCTTGTCTGCTTTCTATTCATCTGCATCATCATGTCCCACTATAACATTGGACTTAACCCAAACTTCCAATAACTTCTTCAAATTCCAAATGCCTATTTCTTCAAACCACTACCAACCTTTTCCTCTTTCATTGCATGGTTACCCTCAACAGTCTCAGGGATTGTGTTTGTCTTCTAATGTTTCAACTATAAAACCCTCAGACTCAGAGAAAAACCTTGCCTTGATAGATGTTGTGTGTCAAGCTATAATCAAGGATCCTTCTATTAAGGCAGCATTAGATGCAGTAGTTTCTTCACTCACTTGA 777 0.4157 MAMQQQSSSPKIKKQIILEDDRAASEFASCRKVRVSIRARSDFSLMSDGCRWRKYGQKISKVNPYCPRAYYRCNMGLGTIPCPVRKQVQRCCVDETVFITTYEGNHNHSLPPAARLTASTTSAALSMFLSGSTTSLHGSTTLSNAGLFSSSSSSASTGLSAFYSSASSCPTITLDLTQTSNNFFKFQMPISSNHYQPFPLSLHGYPQQSQGLCLSSNVSTIKPSDSEKNLALIDVVCQAIIKDPSIKAALDAVVSSLT* 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g5030 258 SUPERFAMILY WRKY DNA-binding domain 39 111 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mal5g5030 258 Pfam WRKY DNA -binding domain 48 108 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal5g5030 258 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 8 258 - -
Mal5g5030 258 ProSiteProfiles WRKY domain profile. 41 111 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal5g5030 258 SMART WRKY_cls 46 110 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal5g5030 258 Gene3D WRKY domain 31 112 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mal5g5030 258 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 8 258 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g5030 Mal-Chr5 123892706 123894872 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g5030 21 179 WRKY Transcription Factor Family AT4G04450 58.282 4.21e-53 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mal5g5030 WRKY 3.2e-18 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g5030 - - aprc:113848172 273.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g2811 4 80706204 80709817 Mal5g5030 5 123892706 123894872 PCT