Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g5021 ATGTTGGCCAAGGCTAGCTTGGATGGAGATATTGCTTCAACTGAGATGACAGGGTCAACAAGTCATCATCCACCAGTTCCTGCAGGTGCTGAAAATGTTCAAGAAATGGATGACATGCACCAGGATTCCACGAATAACAAGGTGAAGGATCAAAGCAATAAGACAGTAGCCTTTTACAAGCTTTTCTCATTTGCAGACTCTTGGGATTATTTGTTGATGTTTGTTGGGACTATAAGTGGTGTTGCGAATGGAGTCTCTATGCCTTTAATGACAATAATTATTGGAGATGCTATTGATGCTTTTGGAGGAAATGTTAGCACCAAACAAGTCGTTCATCAAGTTTCCAAGGTGTCTCTCAAGTTTGCGATCATGGGTGCATGCGCCTTTTTTGCAGTGTTTCTACAGGTGTCTTGTTGGATGATCACAGGGGAGAGACAAGCTGCAAGAATAAGGGCATTATACCTCAAAGCGATTTTAAGGCAAGATATCAGTTTCTTTGACAAGGAAACAAACAGTGGTGAGGTTGTTGGGAGAATGTCAGGTGACACGGTACTTATTCAAGAAGCCATGGGAGAGAAGGTAGGAAAATTCATACAGTATGTGTCATGTTTTCTAGGAGGTTTAGTTGTGGCATTCATCAAGGGTTGGCTTCTAACCCTTGTCCTTCTATCGTCTCTTCCTCTTCTTGTCCTCTCTGGTTCCATAATGAGCTTTGCCTTCGCAATGATGGCATCCCGTGGACAAGCAGCATATTCTGAAGCAGCAACTATAGTAGAGCGGATAATTGGTTCAACTCGAACAGTTGCATCATTTACCGGCGAGAAGCAAGCTATAGCTCAATACAATCAATCCTTAACTAAAGCTTACAGAATTGGAGTACAAGAGGGATTGGCTATTGGTTTGGGCCTTGGTTCGGTCCGTTTATTTGTATATTGCAGTTATGCTTTGGCTGTATGGTTTGGAGGGAAGATGGTACTAGAGAAAGGTTATACAGGAGGTGAAGTCATAAGTGTATTTTTTGCAATACTAACAGGTTCCTTGTCTCTAGGACAGGCAACTCCATGCTTAACAGCATTTGCTGCTGGACAAGCTGCAGCATTTAAGATGTTCGAAACGATCAAAAGGAAGCCGGAAATCGATGCTTATGACACAACCGGGAGAAAGCTTGATGACATTCGCGGAGACATAGAACTCAGGGAGGTTTGCTTTAGTTATCCTACAAGACCAAATGAACTGATATTCAATGCATTTTCTTTTTTGATATCAAGTGGCACTACCGCGGCTTTGGTTGGGCAAAGTGGGAGTGGGAAATCGACGGTTATTAGTTTGATAGAGAGATTTTATGATCCACAAGGCGGAGAAATTCTCATTGATGGTATAAACCTCAGAGAATTTCAACTGAAATGGATCAGACAAAAAATCGGTCTAGTCAGTCAGGAACCGGTTCTCTTTACTTGTAGCATTAAAGAGAATATTGCCTATGGTAAGGATGCAGCAACCGATGAAGAAATCAGAGCAGCAGCAGAACTTGCTAATGCTGCTAACTTCATCGATAAATTTCCCCATGGACTTGAAACGATGGTCGGAGAGCATGGAGCTCAACTTTCTGGAGGTCAAAAGCAAAGAATTGCTATAGCAAGAGCAATTCTGAAAGATCCAAGAATTCTACTCCTTGATGAAGCAACAAGTGCCCTTGATGCAGAATCTGAAAGAGTAGTACAAGAGACACTAGACAGAATTATGATAAACCGAACAACCATCATTGTAGCCCACCGCCTTAGCACAATAAGGAATGCTGATATCATTGCTGTTATTCACCAAGGAAAAGTAGTAGAAAAAGGTACACATGCTGATCTGACTAAAGATTCCGATGGAGCTTATAGTCAACTCATTAGGTTGCAAGAAATTAAAAGGGATTCATCAGAACATTATGGTGCTAATGACATAGAAAACTTTGTAGATTCTGGAAAAGAATCAAGCCAAGGGCCTTTAAGCCGCGGATCATCTGGGATAGGAAACAGCAGTCACCATTCATTCATAGTACCAAACTCTATGCCTACCACACAAGTAGGAGGGTCTGAAAAATTGGTTCCTTCAGAAGCATCATCACATAAAAATAAAACTCAAGATGTTCTGTTTCTGCGCCTCGCATATCTTAACAAGCCTGAAATCCCAGTGTTACTCATAGGGACTCTAGCTGCAGCTGTAACCGGAGCAATGCTACCAATTCTGGGGCTTCTAGTCTCCAAAATGATAAATACATTCTTTGAGCCTGCAGATGAACTTCGTAAAGACTCAAAATTTTGGGCATTAATATTTGTTTCCCTTAGCGTGGCTTCTTTTGCTTTCCATCCGTTAAGGTCGTACTTTTTTGCTGTTGCTGGTTCTAAGTTGATAAAAAGAATCCGCTTAATGTGCTTCGAGAAAATAATTCACATGGAAGTAGGATGGTTTGATAAAGCTGAGAATTCAAGTGGTGCACTTGGTGCAAGGTTGTCAACTGATGCTGCTTCCATTCGAACTTTGGTTGGCGATGCACTCGGTTTGCTTGTTCAAGATATTTCTACAGTTATTACAGCCTTCGTGATTTCCTTTGAGGCAAATTGGCAGCTTTCTCTCATCATTCTTGTGTTGCTACCTCTACTATTAGTAAATGGACATTTGCAAATCAAGTCCATGCAAGGATTCAGCACAGACGCAAAGAAACTATATGAGGAAGCAAGTCAAGTAGCGAACGATGCAGTAGGGAATATCAGAACTGTTTCTGCTTTCTGTGCTGAAGAGAAGGTGATGGAGTTATACCAGAAGAAATGTGTAGTACCAGTCCAGACAGGAAAAAGGCATGGATTAGTCAGTGGAACTGGTTTTGGCTTAGCAATCTTCTTTCTGTTTTGTGTCTATGCATGCAGTTTTTATGCCGGCGCCCAACTTGTTGAGAATGGCAAAACTTCAATATCAGAAGTTTTTCAAGTATTTTTCTCTCTCACAATGGCAGCCGCTGCAATATCTCAATCCTGCTTCATGGCTCCAGGAGCTAGTAAAGCAAAAAGTTCTGCTGCTTCTATATTTGCTATTCTTGACCAGAAATCAAAAATAGACACCAGTGATGAATCAGGAATGGCATTGGAAGATGTGAAGGGAGAGATTGAGTTTCACAATGTCGCTTTCAAGTATCCAACTAGACCTGATGTTCATATATTCAAAAATCTTTCCTTAACCATTCATTCAGGACAGACAGTTGCATTGGTTGGAGAAAGTGGAAGTGGAAAATCAACAGTGATCTCATTGTTGCAAAGATTTTATGATCCAGATTCAGGTCAGATTAAACTGGATGGAACAGATATCCAAAAGCTACAGCTTAAATGGTTTAGGCAACAAATGGGCCTGGTAAGCCAGGAGCCTGTGCTGTTCAATGACACCATCAGAGCCAACATTGCTTATGGAAAATGTGGTATTGCAACTGAGGCTGAAATTATAGCTGCAGCAGAGCTGGCAAATGCTCATAACTTCATTAGCAGTTTGCAGCAGGGATATGATACAATAGTAGGGGAGAGAGGGATTCAACTATCTGGAGGACAGAAGCAACGTGTGGCAATTGCAAGAGCCATAGTTAACAGTCCAAGAATATTACTACTAGATGAAGCCACAAGTGCACTTGATGCTGAGTCTGAAAAAGTGGTTCAGGATGCACTTGATAGAGTGAGGGTGGACAGAACCACCATTGTGGTGGCTCATAGATTATCTACCATAAAGGGTGCAAATTCAATTGCAGTTGTTAAAAATGGAGTGATTGAAGAGAAAGGAAAACATGACACATTGATCAACAAGGGTGGTACCTATGCTTCTTTAGTAGCACTCCACACAACTAGCACTGCTTCATCTTAA 3885 0.4136 MLAKASLDGDIASTEMTGSTSHHPPVPAGAENVQEMDDMHQDSTNNKVKDQSNKTVAFYKLFSFADSWDYLLMFVGTISGVANGVSMPLMTIIIGDAIDAFGGNVSTKQVVHQVSKVSLKFAIMGACAFFAVFLQVSCWMITGERQAARIRALYLKAILRQDISFFDKETNSGEVVGRMSGDTVLIQEAMGEKVGKFIQYVSCFLGGLVVAFIKGWLLTLVLLSSLPLLVLSGSIMSFAFAMMASRGQAAYSEAATIVERIIGSTRTVASFTGEKQAIAQYNQSLTKAYRIGVQEGLAIGLGLGSVRLFVYCSYALAVWFGGKMVLEKGYTGGEVISVFFAILTGSLSLGQATPCLTAFAAGQAAAFKMFETIKRKPEIDAYDTTGRKLDDIRGDIELREVCFSYPTRPNELIFNAFSFLISSGTTAALVGQSGSGKSTVISLIERFYDPQGGEILIDGINLREFQLKWIRQKIGLVSQEPVLFTCSIKENIAYGKDAATDEEIRAAAELANAANFIDKFPHGLETMVGEHGAQLSGGQKQRIAIARAILKDPRILLLDEATSALDAESERVVQETLDRIMINRTTIIVAHRLSTIRNADIIAVIHQGKVVEKGTHADLTKDSDGAYSQLIRLQEIKRDSSEHYGANDIENFVDSGKESSQGPLSRGSSGIGNSSHHSFIVPNSMPTTQVGGSEKLVPSEASSHKNKTQDVLFLRLAYLNKPEIPVLLIGTLAAAVTGAMLPILGLLVSKMINTFFEPADELRKDSKFWALIFVSLSVASFAFHPLRSYFFAVAGSKLIKRIRLMCFEKIIHMEVGWFDKAENSSGALGARLSTDAASIRTLVGDALGLLVQDISTVITAFVISFEANWQLSLIILVLLPLLLVNGHLQIKSMQGFSTDAKKLYEEASQVANDAVGNIRTVSAFCAEEKVMELYQKKCVVPVQTGKRHGLVSGTGFGLAIFFLFCVYACSFYAGAQLVENGKTSISEVFQVFFSLTMAAAAISQSCFMAPGASKAKSSAASIFAILDQKSKIDTSDESGMALEDVKGEIEFHNVAFKYPTRPDVHIFKNLSLTIHSGQTVALVGESGSGKSTVISLLQRFYDPDSGQIKLDGTDIQKLQLKWFRQQMGLVSQEPVLFNDTIRANIAYGKCGIATEAEIIAAAELANAHNFISSLQQGYDTIVGERGIQLSGGQKQRVAIARAIVNSPRILLLDEATSALDAESEKVVQDALDRVRVDRTTIVVAHRLSTIKGANSIAVVKNGVIEEKGKHDTLINKGGTYASLVALHTTSTASS* 1295
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mal5g5021 1294 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 388 634 IPR027417 -
Mal5g5021 1294 Gene3D - 394 663 IPR027417 -
Mal5g5021 1294 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 74 361 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal5g5021 1294 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1049 1286 IPR003439 GO:0005524
Mal5g5021 1294 MobiDBLite consensus disorder prediction 655 702 - -
Mal5g5021 1294 ProSitePatterns ABC transporters family signature. 1189 1203 IPR017871 GO:0005524
Mal5g5021 1294 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 396 632 IPR003439 GO:0005524
Mal5g5021 1294 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 728 1014 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal5g5021 1294 Gene3D ABC transporter type 1, transmembrane domain 120 1015 IPR036640 GO:0005524|GO:0016021
Mal5g5021 1294 MobiDBLite consensus disorder prediction 655 696 - -
Mal5g5021 1294 PANTHER - 39 1290 - -
Mal5g5021 1294 ProSitePatterns ABC transporters family signature. 535 549 IPR017871 GO:0005524
Mal5g5021 1294 MobiDBLite consensus disorder prediction 1 30 - -
Mal5g5021 1294 Gene3D - 1039 1293 IPR027417 -
Mal5g5021 1294 SUPERFAMILY ABC transporter transmembrane region 715 1029 IPR036640 GO:0005524|GO:0016021
Mal5g5021 1294 PANTHER ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL 39 1290 - -
Mal5g5021 1294 CDD ABC_6TM_Pgp_ABCB1_D1_like 73 357 - -
Mal5g5021 1294 Pfam ABC transporter 1068 1217 IPR003439 GO:0005524
Mal5g5021 1294 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1038 1286 IPR027417 -
Mal5g5021 1294 CDD ABC_6TM_Pgp_ABCB1_D2_like 717 1032 - -
Mal5g5021 1294 Pfam ABC transporter 415 563 IPR003439 GO:0005524
Mal5g5021 1294 CDD ABC_MTABC3_MDL1_MDL2 1049 1284 - -
Mal5g5021 1294 Pfam ABC transporter transmembrane region 727 998 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal5g5021 1294 Pfam ABC transporter transmembrane region 73 347 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal5g5021 1294 SUPERFAMILY ABC transporter transmembrane region 60 380 IPR036640 GO:0005524|GO:0016021
Mal5g5021 1294 CDD ABC_MTABC3_MDL1_MDL2 396 634 - -
Mal5g5021 1294 SMART AAA_5 1076 1270 IPR003593 -
Mal5g5021 1294 SMART AAA_5 423 595 IPR003593 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Mal5g5021 Mal-Chr5 123805330 123810928 Dispersed/Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g5021 54 1287 Calmodulin-binding Proteins AT2G36910 42.994 0.0 1021
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g5021 K05658 - gmx:100777713 1960.65