Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mal5g5021 | ATGTTGGCCAAGGCTAGCTTGGATGGAGATATTGCTTCAACTGAGATGACAGGGTCAACAAGTCATCATCCACCAGTTCCTGCAGGTGCTGAAAATGTTCAAGAAATGGATGACATGCACCAGGATTCCACGAATAACAAGGTGAAGGATCAAAGCAATAAGACAGTAGCCTTTTACAAGCTTTTCTCATTTGCAGACTCTTGGGATTATTTGTTGATGTTTGTTGGGACTATAAGTGGTGTTGCGAATGGAGTCTCTATGCCTTTAATGACAATAATTATTGGAGATGCTATTGATGCTTTTGGAGGAAATGTTAGCACCAAACAAGTCGTTCATCAAGTTTCCAAGGTGTCTCTCAAGTTTGCGATCATGGGTGCATGCGCCTTTTTTGCAGTGTTTCTACAGGTGTCTTGTTGGATGATCACAGGGGAGAGACAAGCTGCAAGAATAAGGGCATTATACCTCAAAGCGATTTTAAGGCAAGATATCAGTTTCTTTGACAAGGAAACAAACAGTGGTGAGGTTGTTGGGAGAATGTCAGGTGACACGGTACTTATTCAAGAAGCCATGGGAGAGAAGGTAGGAAAATTCATACAGTATGTGTCATGTTTTCTAGGAGGTTTAGTTGTGGCATTCATCAAGGGTTGGCTTCTAACCCTTGTCCTTCTATCGTCTCTTCCTCTTCTTGTCCTCTCTGGTTCCATAATGAGCTTTGCCTTCGCAATGATGGCATCCCGTGGACAAGCAGCATATTCTGAAGCAGCAACTATAGTAGAGCGGATAATTGGTTCAACTCGAACAGTTGCATCATTTACCGGCGAGAAGCAAGCTATAGCTCAATACAATCAATCCTTAACTAAAGCTTACAGAATTGGAGTACAAGAGGGATTGGCTATTGGTTTGGGCCTTGGTTCGGTCCGTTTATTTGTATATTGCAGTTATGCTTTGGCTGTATGGTTTGGAGGGAAGATGGTACTAGAGAAAGGTTATACAGGAGGTGAAGTCATAAGTGTATTTTTTGCAATACTAACAGGTTCCTTGTCTCTAGGACAGGCAACTCCATGCTTAACAGCATTTGCTGCTGGACAAGCTGCAGCATTTAAGATGTTCGAAACGATCAAAAGGAAGCCGGAAATCGATGCTTATGACACAACCGGGAGAAAGCTTGATGACATTCGCGGAGACATAGAACTCAGGGAGGTTTGCTTTAGTTATCCTACAAGACCAAATGAACTGATATTCAATGCATTTTCTTTTTTGATATCAAGTGGCACTACCGCGGCTTTGGTTGGGCAAAGTGGGAGTGGGAAATCGACGGTTATTAGTTTGATAGAGAGATTTTATGATCCACAAGGCGGAGAAATTCTCATTGATGGTATAAACCTCAGAGAATTTCAACTGAAATGGATCAGACAAAAAATCGGTCTAGTCAGTCAGGAACCGGTTCTCTTTACTTGTAGCATTAAAGAGAATATTGCCTATGGTAAGGATGCAGCAACCGATGAAGAAATCAGAGCAGCAGCAGAACTTGCTAATGCTGCTAACTTCATCGATAAATTTCCCCATGGACTTGAAACGATGGTCGGAGAGCATGGAGCTCAACTTTCTGGAGGTCAAAAGCAAAGAATTGCTATAGCAAGAGCAATTCTGAAAGATCCAAGAATTCTACTCCTTGATGAAGCAACAAGTGCCCTTGATGCAGAATCTGAAAGAGTAGTACAAGAGACACTAGACAGAATTATGATAAACCGAACAACCATCATTGTAGCCCACCGCCTTAGCACAATAAGGAATGCTGATATCATTGCTGTTATTCACCAAGGAAAAGTAGTAGAAAAAGGTACACATGCTGATCTGACTAAAGATTCCGATGGAGCTTATAGTCAACTCATTAGGTTGCAAGAAATTAAAAGGGATTCATCAGAACATTATGGTGCTAATGACATAGAAAACTTTGTAGATTCTGGAAAAGAATCAAGCCAAGGGCCTTTAAGCCGCGGATCATCTGGGATAGGAAACAGCAGTCACCATTCATTCATAGTACCAAACTCTATGCCTACCACACAAGTAGGAGGGTCTGAAAAATTGGTTCCTTCAGAAGCATCATCACATAAAAATAAAACTCAAGATGTTCTGTTTCTGCGCCTCGCATATCTTAACAAGCCTGAAATCCCAGTGTTACTCATAGGGACTCTAGCTGCAGCTGTAACCGGAGCAATGCTACCAATTCTGGGGCTTCTAGTCTCCAAAATGATAAATACATTCTTTGAGCCTGCAGATGAACTTCGTAAAGACTCAAAATTTTGGGCATTAATATTTGTTTCCCTTAGCGTGGCTTCTTTTGCTTTCCATCCGTTAAGGTCGTACTTTTTTGCTGTTGCTGGTTCTAAGTTGATAAAAAGAATCCGCTTAATGTGCTTCGAGAAAATAATTCACATGGAAGTAGGATGGTTTGATAAAGCTGAGAATTCAAGTGGTGCACTTGGTGCAAGGTTGTCAACTGATGCTGCTTCCATTCGAACTTTGGTTGGCGATGCACTCGGTTTGCTTGTTCAAGATATTTCTACAGTTATTACAGCCTTCGTGATTTCCTTTGAGGCAAATTGGCAGCTTTCTCTCATCATTCTTGTGTTGCTACCTCTACTATTAGTAAATGGACATTTGCAAATCAAGTCCATGCAAGGATTCAGCACAGACGCAAAGAAACTATATGAGGAAGCAAGTCAAGTAGCGAACGATGCAGTAGGGAATATCAGAACTGTTTCTGCTTTCTGTGCTGAAGAGAAGGTGATGGAGTTATACCAGAAGAAATGTGTAGTACCAGTCCAGACAGGAAAAAGGCATGGATTAGTCAGTGGAACTGGTTTTGGCTTAGCAATCTTCTTTCTGTTTTGTGTCTATGCATGCAGTTTTTATGCCGGCGCCCAACTTGTTGAGAATGGCAAAACTTCAATATCAGAAGTTTTTCAAGTATTTTTCTCTCTCACAATGGCAGCCGCTGCAATATCTCAATCCTGCTTCATGGCTCCAGGAGCTAGTAAAGCAAAAAGTTCTGCTGCTTCTATATTTGCTATTCTTGACCAGAAATCAAAAATAGACACCAGTGATGAATCAGGAATGGCATTGGAAGATGTGAAGGGAGAGATTGAGTTTCACAATGTCGCTTTCAAGTATCCAACTAGACCTGATGTTCATATATTCAAAAATCTTTCCTTAACCATTCATTCAGGACAGACAGTTGCATTGGTTGGAGAAAGTGGAAGTGGAAAATCAACAGTGATCTCATTGTTGCAAAGATTTTATGATCCAGATTCAGGTCAGATTAAACTGGATGGAACAGATATCCAAAAGCTACAGCTTAAATGGTTTAGGCAACAAATGGGCCTGGTAAGCCAGGAGCCTGTGCTGTTCAATGACACCATCAGAGCCAACATTGCTTATGGAAAATGTGGTATTGCAACTGAGGCTGAAATTATAGCTGCAGCAGAGCTGGCAAATGCTCATAACTTCATTAGCAGTTTGCAGCAGGGATATGATACAATAGTAGGGGAGAGAGGGATTCAACTATCTGGAGGACAGAAGCAACGTGTGGCAATTGCAAGAGCCATAGTTAACAGTCCAAGAATATTACTACTAGATGAAGCCACAAGTGCACTTGATGCTGAGTCTGAAAAAGTGGTTCAGGATGCACTTGATAGAGTGAGGGTGGACAGAACCACCATTGTGGTGGCTCATAGATTATCTACCATAAAGGGTGCAAATTCAATTGCAGTTGTTAAAAATGGAGTGATTGAAGAGAAAGGAAAACATGACACATTGATCAACAAGGGTGGTACCTATGCTTCTTTAGTAGCACTCCACACAACTAGCACTGCTTCATCTTAA | 3885 | 0.4136 | MLAKASLDGDIASTEMTGSTSHHPPVPAGAENVQEMDDMHQDSTNNKVKDQSNKTVAFYKLFSFADSWDYLLMFVGTISGVANGVSMPLMTIIIGDAIDAFGGNVSTKQVVHQVSKVSLKFAIMGACAFFAVFLQVSCWMITGERQAARIRALYLKAILRQDISFFDKETNSGEVVGRMSGDTVLIQEAMGEKVGKFIQYVSCFLGGLVVAFIKGWLLTLVLLSSLPLLVLSGSIMSFAFAMMASRGQAAYSEAATIVERIIGSTRTVASFTGEKQAIAQYNQSLTKAYRIGVQEGLAIGLGLGSVRLFVYCSYALAVWFGGKMVLEKGYTGGEVISVFFAILTGSLSLGQATPCLTAFAAGQAAAFKMFETIKRKPEIDAYDTTGRKLDDIRGDIELREVCFSYPTRPNELIFNAFSFLISSGTTAALVGQSGSGKSTVISLIERFYDPQGGEILIDGINLREFQLKWIRQKIGLVSQEPVLFTCSIKENIAYGKDAATDEEIRAAAELANAANFIDKFPHGLETMVGEHGAQLSGGQKQRIAIARAILKDPRILLLDEATSALDAESERVVQETLDRIMINRTTIIVAHRLSTIRNADIIAVIHQGKVVEKGTHADLTKDSDGAYSQLIRLQEIKRDSSEHYGANDIENFVDSGKESSQGPLSRGSSGIGNSSHHSFIVPNSMPTTQVGGSEKLVPSEASSHKNKTQDVLFLRLAYLNKPEIPVLLIGTLAAAVTGAMLPILGLLVSKMINTFFEPADELRKDSKFWALIFVSLSVASFAFHPLRSYFFAVAGSKLIKRIRLMCFEKIIHMEVGWFDKAENSSGALGARLSTDAASIRTLVGDALGLLVQDISTVITAFVISFEANWQLSLIILVLLPLLLVNGHLQIKSMQGFSTDAKKLYEEASQVANDAVGNIRTVSAFCAEEKVMELYQKKCVVPVQTGKRHGLVSGTGFGLAIFFLFCVYACSFYAGAQLVENGKTSISEVFQVFFSLTMAAAAISQSCFMAPGASKAKSSAASIFAILDQKSKIDTSDESGMALEDVKGEIEFHNVAFKYPTRPDVHIFKNLSLTIHSGQTVALVGESGSGKSTVISLLQRFYDPDSGQIKLDGTDIQKLQLKWFRQQMGLVSQEPVLFNDTIRANIAYGKCGIATEAEIIAAAELANAHNFISSLQQGYDTIVGERGIQLSGGQKQRVAIARAIVNSPRILLLDEATSALDAESEKVVQDALDRVRVDRTTIVVAHRLSTIKGANSIAVVKNGVIEEKGKHDTLINKGGTYASLVALHTTSTASS* | 1295 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mal5g5021 | 1294 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 388 | 634 | IPR027417 | - | |
Mal5g5021 | 1294 | Gene3D | - | 394 | 663 | IPR027417 | - | |
Mal5g5021 | 1294 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 74 | 361 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 | |
Mal5g5021 | 1294 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 1049 | 1286 | IPR003439 | GO:0005524 | |
Mal5g5021 | 1294 | MobiDBLite | consensus disorder prediction | 655 | 702 | - | - | |
Mal5g5021 | 1294 | ProSitePatterns | ABC transporters family signature. | 1189 | 1203 | IPR017871 | GO:0005524 | |
Mal5g5021 | 1294 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 396 | 632 | IPR003439 | GO:0005524 | |
Mal5g5021 | 1294 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 728 | 1014 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 | |
Mal5g5021 | 1294 | Gene3D | ABC transporter type 1, transmembrane domain | 120 | 1015 | IPR036640 | GO:0005524|GO:0016021 | |
Mal5g5021 | 1294 | MobiDBLite | consensus disorder prediction | 655 | 696 | - | - | |
Mal5g5021 | 1294 | PANTHER | - | 39 | 1290 | - | - | |
Mal5g5021 | 1294 | ProSitePatterns | ABC transporters family signature. | 535 | 549 | IPR017871 | GO:0005524 | |
Mal5g5021 | 1294 | MobiDBLite | consensus disorder prediction | 1 | 30 | - | - | |
Mal5g5021 | 1294 | Gene3D | - | 1039 | 1293 | IPR027417 | - | |
Mal5g5021 | 1294 | SUPERFAMILY | ABC transporter transmembrane region | 715 | 1029 | IPR036640 | GO:0005524|GO:0016021 | |
Mal5g5021 | 1294 | PANTHER | ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL | 39 | 1290 | - | - | |
Mal5g5021 | 1294 | CDD | ABC_6TM_Pgp_ABCB1_D1_like | 73 | 357 | - | - | |
Mal5g5021 | 1294 | Pfam | ABC transporter | 1068 | 1217 | IPR003439 | GO:0005524 | |
Mal5g5021 | 1294 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 1038 | 1286 | IPR027417 | - | |
Mal5g5021 | 1294 | CDD | ABC_6TM_Pgp_ABCB1_D2_like | 717 | 1032 | - | - | |
Mal5g5021 | 1294 | Pfam | ABC transporter | 415 | 563 | IPR003439 | GO:0005524 | |
Mal5g5021 | 1294 | CDD | ABC_MTABC3_MDL1_MDL2 | 1049 | 1284 | - | - | |
Mal5g5021 | 1294 | Pfam | ABC transporter transmembrane region | 727 | 998 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 | |
Mal5g5021 | 1294 | Pfam | ABC transporter transmembrane region | 73 | 347 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 | |
Mal5g5021 | 1294 | SUPERFAMILY | ABC transporter transmembrane region | 60 | 380 | IPR036640 | GO:0005524|GO:0016021 | |
Mal5g5021 | 1294 | CDD | ABC_MTABC3_MDL1_MDL2 | 396 | 634 | - | - | |
Mal5g5021 | 1294 | SMART | AAA_5 | 1076 | 1270 | IPR003593 | - | |
Mal5g5021 | 1294 | SMART | AAA_5 | 423 | 595 | IPR003593 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mal5g5021 | Mal-Chr5 | 123805330 | 123810928 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mal5g5021 | 54 | 1287 | Calmodulin-binding Proteins | AT2G36910 | 42.994 | 0.0 | 1021 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mal5g5021 | K05658 | - | gmx:100777713 | 1960.65 |