Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g5020 ATGTTACATAAATTGGCAACCATTTTCCAACTAACAATTGTTCTTATTTCTTCATTCTTTCATTCATTCCTAAATTTGGTTGCTACGGCTAGTTTTCCATCATCTTTGAAGGCTAAAATTACTTCAGCTTTTGGTTCTAAAAGATTTTTACAATTTAGAGTCATTGGTTTAAGGGTTTGTAAGCAAAGCAAGTCTTCCTCTAAAGAAATGGATGGAGATGTTGCAAGTATTCAGCCAGTAGTAGATACTGGCAGCAAGCAAGATTCGGAAAAGAAAAAGGCTAAAGATGAAACCACCAATACAGTACCTTTATATAAGCTTTTCTCATTTGCTGATCCTTTGGATCATTTATTGATGTTTGTTGGTACTGTTGGTGCTATTGGGAATGGAATCTCCATGCCCTTAATGACTTTAATATTTGGAAATATGATCAATGCATTTGGAGGATCAACAAGCACCCAAGAAGTTGTTGATGAAGTTTCCAAGGTGTCCTTGAAATTCGTATACTTGGCCGCGGGTACCTTTGTTGCGTCTCTTTTGCAGTTGACTTGCTGGATGATCACTGGTGAGAGACAGGCTGCAAGAATCAGAGGCTTATACCTCCAAACTATTTTGAGGCAAGATGTGAGTTTCTTTGATAAGGAAACTAATACTGGAGAGGTTGTTGGAAGAATGTCAGGTGACACTGTTCTTATTCAAGATGCCATGGGTGAAAAGGTGGGACAGTTTATACAGTTAGTGGCTACTTTCTTTGGAGGTTTTGTGGTAGCATTCATCAAGGGATGGCTTTTAACTGTTGTCATGATGTCTTGTATTCCACTTCTTGTCTTGTCTGGTGCCATTATGAGCTTGCTTATTGCAAAAGCATCATCCAGTGGACAAGCAGCATATTCTAAAGCAGCAACTGTTGTAGAGCAGACAATAGGCTCTATCAGAACTGTTGCGTCGTTCACCGGAGAGAAACAGGCCATAGCTAAATATGACCAGTCCTTAATTGATGCTTACAAAACTGTAGTAAAAGAGGCACTAGCTTCTGGTTTAGGGTTTGGTTCACTCTACTTTGTTGTTATTGCTAGTTATGGTTTGGCAGTATGGTTTGGTGGAAAAATGATAATAGAGAAAGGATATACAGGAGGGGAAGTTGTGACTATAATTTTTGCTGTATTGACTGGATCCATGTCACTGGGCCAGGCATCTCCAAGCTTGAGTGCTTTTGCTGCAGGAAAAGCTGCAGCATATAAGATGTTTGAAACGATTCAAAGGAAGCCGGAAATTGATGCTTATGACACAACCGGGCGAAAGCTCGATGACATTCGTGGAGACATAGAGCTTAGGGAGGTTTGCTTTAGGTATCCTACAAGACCGGATGAACTGATATTCAATGGATTTTCTCTTACAATACCAAGTGGGACTACTGTAGCTTTGGTAGGGCAAAGTGGGAGTGGAAAATCCACAGTTGTCAGTTTGATAGAGAGATTTTATGATCCACAGGCTGGTGAAGTTCTCATTGATGGTATCAACCTCAAAGAGTTTCAACTGAAATGGATCAGACAGAAAATAGGCCTAGTAAGCCAGGAACCGGTTCTCTTTACTTGTAGCATTAAAGAGAATATTGCCTATGGTAAGGATGGTGCTACCGATGAAGAAATCAGAGCTGCAGCAGAACTTGCTAATGCCGCCAAATTTATAGATAAACTTCCTCAGGGACTAGACACAATGGTTGGTGAGCATGGAACTCAGCTCTCTGGGGGACAAAAGCAAAGAGTTGCAATAGCAAGAGCGATTCTGAAAGATCCAAGAATATTACTTCTTGACGAAGCTACAAGTGCGCTTGATGCTGAATCTGAGAGAATTGTACAAGAGGCATTGGATAGAATAATGGTAAACCGAACAACTGTCATTGTAGCTCACCGTTTAAGTACCATAAAGAATGCTGATACCATTGCCGTTATTCATCAAGGAAAAATAATTGAAAGAGGTTCACATGCTCAGCTCACAAGGGATCCTGATGGAGCCTATAGCCAGCTCATTAGGCTGCAAGAAATGAAGGGGTCAGAACAGAATGTTGCAAATGACAATAACAAGTCCAACAGTATAGTGCTATCTGAAAGACGATCGGGTCAAAGATCTTTATCCTCGAGATCTTTAAGCCAAGTGTCATCTGGAGGTGGAAACAGCGGCCGTCACTCATTCTCAGCATCACATGTTGTGCCGACCATACCAGTTGGCTTCTCAGAAATTGCGGATGGTGGACCACAAGCTCCTCCTTCAACGGTTTCTTCACCACCAGAAGTGCCGCTTTATCGCCTGGCCTATTTAAACAAGCCAGAGATTCCAGTCTTACTTATAGGGACTATAGCTGCTGTGCTGCATGGTGTAATATTACCAGTTTTCGGCCTCTTACTTTCAAAAATGATTAGTATTTTTTACGAGCCAGCTGACGAACTTCGTCACGATTCAAAAGTTTGGGCGTTAGTATTTGTTGGGCTCGGAGTGGCGTCGCTATTCATTTTTCCATGTAGATTCTACTTTTTTGGCATTGCTGGAGGTAAGTTGATCAAAAGGATTCGGAAAATGTGTTTTGAGAAGGTAGTTCATATGGAAGTAAGTTGGTTTGATGAAGCTGAACATTCAAGTGGAGCAATTGGAGCAAGGCTCTCTACCGATGCAGCTTCGATTCGAGCTTTGGTTGGTGATGCACTCGGTTTACTGGTTGAAAATATTGCTACAGCTATAGCTGGCTTGGTAATTGCCTTTGTAGCTAGCTGGCAGCTTGCTATTATAATCCTTGCTTTGGTGCCTCTACTAGGCCTTAATGGATTTTTGCAAGTAAAGTTCTTGAAAGGGTTCAGCAATGATTCAAAGAAAGTGTACGAGGAAGCAAGTCAAGTGGCGAATGATGCAGTAGGGAGTATAAGAACAGTTGCTTCATTCTGTTCTGAAGAGAAGGTGATGGAGTTATATAAGCAAAAATGTGAGGGACCAATTAAGACAGGCATAAGACGAGGGATAGTAAGCGGATTTGGTTTCGGGATATCATTCTTCGTGTTGTATGCAGTTTATGCATGCAGTTTTTATGCTGGAGCGCGTCTTGTTGAGGATGAAAAATCTTCATTCTCAGATGTTTTCCGTGTCTTTTTTGCTCTAAGCATGGCAGCCATAGGACTATCTCAATCCGGGTCGTTGGTGCCTGATTCAACTAAGGCGAAAAGTGCGGCTGCTTCCATATTTGCTATTCTTGATAGGAAATCACTCATAGATCCAAGTGATGAATCAGGAATTACATTGGAAGAAGTCAAGGGAGAAATTGAGTTTAAGCATGTCAGTTTCAAGTATCCTACTAGACCTGATATTCAAATATTCAGAGATCTTTGCTTGAACATTCATAGTGGCAAGACAGTTGCACTTGTTGGAGAAAGTGGAAGTGGAAAATCAACAGTGATATCATTGATACAAAGATTTTATGATCCAGACTCAGGTCACATAACACTTGATGGAAAAGAAATCCAAAGTCTTCAAGTGAAATGGCTAAGACAACAAATGGGACTGGTAAGCCAAGAGCCTGTGCTGTTTAATGACACCATCAGAGCCAATATTGCATATGGAAAAGGAGGAGATGCATCAGAGGCAGAGATTATAGCTGCAGCAGAATTAGCAAATGCTCATAGGTTTATTAGTAGTTTGCAGAAGGGTTATGATACAATAGTAGGAGAGAGAGGAGTTCAATTATCCGGAGGACAGAAGCAGCGTGTGGCAATTGCGAGAGCTATAGTGAAGAATCCAAAAATACTATTACTAGATGAAGCAACTAGTGCACTTGATGCTGAGTCTGAGAAGGTGGTTCAAGATGCACTTGACCGTGTTATGGTGGAGCGAACGACAATAATAGTGGCGCATAGGTTATCAACTATTAAGGGTGCAGATTTAATTGCAGTAGTTAAGAATGGTGTGATAGCAGAGAAAGGAAAACATGAAGCATTGCTACATAAGGGTGGTGACTATGCTTCTTTAGTAGCATTACACACAAGTGCTTCTACATCTTAG 4044 0.411 MLHKLATIFQLTIVLISSFFHSFLNLVATASFPSSLKAKITSAFGSKRFLQFRVIGLRVCKQSKSSSKEMDGDVASIQPVVDTGSKQDSEKKKAKDETTNTVPLYKLFSFADPLDHLLMFVGTVGAIGNGISMPLMTLIFGNMINAFGGSTSTQEVVDEVSKVSLKFVYLAAGTFVASLLQLTCWMITGERQAARIRGLYLQTILRQDVSFFDKETNTGEVVGRMSGDTVLIQDAMGEKVGQFIQLVATFFGGFVVAFIKGWLLTVVMMSCIPLLVLSGAIMSLLIAKASSSGQAAYSKAATVVEQTIGSIRTVASFTGEKQAIAKYDQSLIDAYKTVVKEALASGLGFGSLYFVVIASYGLAVWFGGKMIIEKGYTGGEVVTIIFAVLTGSMSLGQASPSLSAFAAGKAAAYKMFETIQRKPEIDAYDTTGRKLDDIRGDIELREVCFRYPTRPDELIFNGFSLTIPSGTTVALVGQSGSGKSTVVSLIERFYDPQAGEVLIDGINLKEFQLKWIRQKIGLVSQEPVLFTCSIKENIAYGKDGATDEEIRAAAELANAAKFIDKLPQGLDTMVGEHGTQLSGGQKQRVAIARAILKDPRILLLDEATSALDAESERIVQEALDRIMVNRTTVIVAHRLSTIKNADTIAVIHQGKIIERGSHAQLTRDPDGAYSQLIRLQEMKGSEQNVANDNNKSNSIVLSERRSGQRSLSSRSLSQVSSGGGNSGRHSFSASHVVPTIPVGFSEIADGGPQAPPSTVSSPPEVPLYRLAYLNKPEIPVLLIGTIAAVLHGVILPVFGLLLSKMISIFYEPADELRHDSKVWALVFVGLGVASLFIFPCRFYFFGIAGGKLIKRIRKMCFEKVVHMEVSWFDEAEHSSGAIGARLSTDAASIRALVGDALGLLVENIATAIAGLVIAFVASWQLAIIILALVPLLGLNGFLQVKFLKGFSNDSKKVYEEASQVANDAVGSIRTVASFCSEEKVMELYKQKCEGPIKTGIRRGIVSGFGFGISFFVLYAVYACSFYAGARLVEDEKSSFSDVFRVFFALSMAAIGLSQSGSLVPDSTKAKSAAASIFAILDRKSLIDPSDESGITLEEVKGEIEFKHVSFKYPTRPDIQIFRDLCLNIHSGKTVALVGESGSGKSTVISLIQRFYDPDSGHITLDGKEIQSLQVKWLRQQMGLVSQEPVLFNDTIRANIAYGKGGDASEAEIIAAAELANAHRFISSLQKGYDTIVGERGVQLSGGQKQRVAIARAIVKNPKILLLDEATSALDAESEKVVQDALDRVMVERTTIIVAHRLSTIKGADLIAVVKNGVIAEKGKHEALLHKGGDYASLVALHTSASTS* 1348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g5020 1347 Pfam ABC transporter transmembrane region 781 1051 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal5g5020 1347 Pfam ABC transporter transmembrane region 119 393 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal5g5020 1347 ProSitePatterns ABC transporters family signature. 581 595 IPR017871 GO:0005524
Mal5g5020 1347 CDD ABC_6TM_Pgp_ABCB1_D2_like 771 1086 - -
Mal5g5020 1347 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1103 1340 IPR003439 GO:0005524
Mal5g5020 1347 PANTHER - 88 1343 - -
Mal5g5020 1347 SUPERFAMILY ABC transporter transmembrane region 769 1087 IPR036640 GO:0005524|GO:0016021
Mal5g5020 1347 CDD ABC_MTABC3_MDL1_MDL2 442 680 - -
Mal5g5020 1347 SUPERFAMILY ABC transporter transmembrane region 106 426 IPR036640 GO:0005524|GO:0016021
Mal5g5020 1347 Gene3D - 440 693 IPR027417 -
Mal5g5020 1347 MobiDBLite consensus disorder prediction 684 732 - -
Mal5g5020 1347 Gene3D - 1093 1346 IPR027417 -
Mal5g5020 1347 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1092 1340 IPR027417 -
Mal5g5020 1347 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 120 407 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal5g5020 1347 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 434 680 IPR027417 -
Mal5g5020 1347 SMART AAA_5 1130 1323 IPR003593 -
Mal5g5020 1347 SMART AAA_5 469 641 IPR003593 -
Mal5g5020 1347 Gene3D ABC transporter type 1, transmembrane domain 165 1077 IPR036640 GO:0005524|GO:0016021
Mal5g5020 1347 CDD ABC_6TM_Pgp_ABCB1_D1_like 119 403 - -
Mal5g5020 1347 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 782 1068 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal5g5020 1347 PANTHER ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL 88 1343 - -
Mal5g5020 1347 Pfam ABC transporter 461 609 IPR003439 GO:0005524
Mal5g5020 1347 ProSitePatterns ABC transporters family signature. 1243 1257 IPR017871 GO:0005524
Mal5g5020 1347 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 442 678 IPR003439 GO:0005524
Mal5g5020 1347 CDD ABC_MTABC3_MDL1_MDL2 1103 1338 - -
Mal5g5020 1347 Pfam ABC transporter 1123 1271 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g5020 Mal-Chr5 123792244 123798478 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g5020 90 1341 Calmodulin-binding Proteins AT2G36910 45.268 0.0 1077
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g5020 K05658 - gmx:100800293 2056.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g5020 5 123792244 123798478 Mal5g5020 5 123792244 123798478 ECH