Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g5019 ATGATCTCAGGGACTAGACACAATGGTTCACATGTCGAGCTCACCAAAGATCCTAATGGAGCCTATAGCCAGCTTATTAGATTGCAACAAATGAAGGGGTCGGAACAAAATGATGCAAATGACACAAACAAGTCAAACAGTGTAATGCTATCTGATAAAAGTTTGAGTCAAATATCTTTATCCTCAAGATCTATAAGGCAGGTGTCATCTGGAAACAGTGGTCGTCACTCTTTCTCAGCATCGTGTGGTTCACCCACAACAGATGGCTTCTTAGAAACTGCGGATGGTGGACCTCAAGCTTCTCTTTCAACAGTTTCTTCATCACCAGAAGTGCCACTTTATCGCCTGGCATATTTTAACAAGCCTGAGATTTCAGTCTTATTGCTGGGTACTATAGCTGCAGTGCTGCATGGAGCAATAATGCCCACTTTCGGGCTCTTGCTTTCTAAAATGATAAGTATTTTCTACAAACCAGCTGATGAACTCCGTCATGATTCAAAAGTTTGGGCAATGGTGTTTGTAGCGGTTGGTGTGGCATCATTACTCGTTATTCCATGTAGATTCTACTTTTTTGGTGTTGCTGGAGGTAAGTTGATCCAAAGAATCCGGAAAATGTGTTTCGAGAAAGTAGTTCACATGGAAGTAAATTGGTTTGATGAGGTTGAGCATTCAAGCGGAGCACTAGGAGCAAGGCTCTCCACTGATGCAGCTTCGGTTAGAGCTCTGGTTGGGGATGCACTTGGTCTGTTGGTTCAAAATATTGCTACAGCAATAGCTGGCTTGGTGATTGCTTTTGAAGCGAGCTGGCAGCTTGCTTTTATAGTCCATGCTTTGGCGCCTCTATTAGGGCTAAATGGATATGTTCAAGTAATGTTCTTGAAAGGATTCAGCGCAGATGCAAAGAAATGTTATGATGCAGTTTATGCCTGCTGTTTCTACGCTGGAGCTCGACTCGTAGAGGATGGCAAATCTACATTCTCAGATGTTTTCCTTGTATTTTTTGCTCTTGGCATGGCAGCTACGGGAATCTCTCAATCAGGGACCTTGGTCCCAGATTCAATTAATGCAAAAAGTGCTACTGCTTCGATATTTGCAATTCTTGATCAGAAGTCACAAATAGATCCTAGTGATGAATCCGGGATGACAATGGAAGAAGTCAAGGGAGAAATTGAGTTTAACCATGTTAGTTTCAAGTATCCTACAAGACCTGATGGCGCAGATCTAATTGCAGTAGTTAAGAATGGTGCGATAGCAGAGAGAGGAAAACATGATGCATTGCTCCATAAGGGTGGTGACTATGCTTCCTTAGTGGCATTGCACATGCACACAGGTGCTTCTACATCTTAG 1347 0.4276 MISGTRHNGSHVELTKDPNGAYSQLIRLQQMKGSEQNDANDTNKSNSVMLSDKSLSQISLSSRSIRQVSSGNSGRHSFSASCGSPTTDGFLETADGGPQASLSTVSSSPEVPLYRLAYFNKPEISVLLLGTIAAVLHGAIMPTFGLLLSKMISIFYKPADELRHDSKVWAMVFVAVGVASLLVIPCRFYFFGVAGGKLIQRIRKMCFEKVVHMEVNWFDEVEHSSGALGARLSTDAASVRALVGDALGLLVQNIATAIAGLVIAFEASWQLAFIVHALAPLLGLNGYVQVMFLKGFSADAKKCYDAVYACCFYAGARLVEDGKSTFSDVFLVFFALGMAATGISQSGTLVPDSINAKSATASIFAILDQKSQIDPSDESGMTMEEVKGEIEFNHVSFKYPTRPDGADLIAVVKNGAIAERGKHDALLHKGGDYASLVALHMHTGASTS* 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g5019 448 PANTHER - 405 443 - -
Mal5g5019 448 PANTHER - 8 305 - -
Mal5g5019 448 PANTHER - 306 404 - -
Mal5g5019 448 CDD ABC_6TM_Pgp_ABCB1_D2_like 117 373 - -
Mal5g5019 448 Pfam ABC transporter transmembrane region 127 304 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal5g5019 448 Gene3D ABC transporter type 1, transmembrane domain 306 379 IPR036640 GO:0005524|GO:0016021
Mal5g5019 448 PANTHER ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL 405 443 - -
Mal5g5019 448 PANTHER ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL 306 404 - -
Mal5g5019 448 Gene3D ABC transporter type 1, transmembrane domain 50 304 IPR036640 GO:0005524|GO:0016021
Mal5g5019 448 MobiDBLite consensus disorder prediction 1 21 - -
Mal5g5019 448 SUPERFAMILY ABC transporter transmembrane region 115 374 IPR036640 GO:0005524|GO:0016021
Mal5g5019 448 Gene3D - 380 404 IPR027417 -
Mal5g5019 448 PANTHER ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL 8 305 - -
Mal5g5019 448 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 128 309 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal5g5019 448 Gene3D - 8 47 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g5019 Mal-Chr5 123747421 123750906 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g5019 9 431 Calmodulin-binding Proteins AT2G36910 27.495 1.08e-46 171