Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g5018 ATGGCAACAGATATCAGTTTGGAAAGAGATATTGCGAGTGTTCAACCAGTTGTAGATCATGACAGCAAACAAGATTCAGAGAAGAGCAAGGACAAAGATGAAACCACCAATACAGTACCCTTATACAAGCTTTTCTCATTTGCTGATCCTTCGGATTGTTTATTGATGCTTATGGGGACTGTGGGTGCTATTGGGAATGGCATCTCTATACCCTTGATGATGTTACTATTTGGAACTATGATCAATGCATTTGGAGATTCCACAAACTCAAAAGTTGTTGATGAAGTCTCTGAGGTGTCTTTGAAATTTGTATACTTGGCTGTTGGTACCTTTGTTGCGTCATTTTTGCAGTTAACTTGCTGGATGATCACCGGGGAGAGACAGAGTGCAAGAATTAGAGGTTTATACCTTAAAACAATTTTGAGGCAAGATGTGAGCTTCTTTGATACGGAAACTAGTACTGGAGAGGTTGTTGGAAGGATGTCAGGTGATACTGTTCTTATTAAAGATGCCATGGGGGAGAAGGTGGGACAGTTCATACAGTTTGTGGCAACTTTCATAGGGGGTTTTGTCATAGCATTCACAAAAGGATGGCTTCTAACTGTTGTCATGCTATCCAGTTTACCACCTCTTATCTTGTCTGGTGCTATGACGAGTATGGTTATTGCAAAAGCATCATCAACTGGACAAACAGCTTATTCTAAATCAGCAAGTGTAGTAGAGCAGACAATAGGTTCCATTCGAACTGTTGCATCATTCACAGGGGAGAAACAAGCTATAACTAAATATAACCAGTCCTTAATCAAGGTCTATAAGACTGCAGTGCAAGAGGCATTGGCATCTGGTGTTGGCTTTGCTATACTCTTTTTTGTTTTCATCTGCAGTTATGGTTTGGCTGTATGGTTTGGTGGGAAAATGATAATAGAGAAAGGATATACCGGAGGGGACGTTATGACTGTGATTTTTTCTGTATTGATTGGTTCAACGTGTCTTGGGCAGACATCTCCAAGCCTAAGTGCTTTTGCTGCAGGACAAGCTGCTGCCTTCAAGATGTTTGAAACAATTAAAAGGAAACCAGAGATTGATGCTTCTGACACAACTGGGAGAAAGCTTGAAGAAGTTCGTGGAGATATAGAACTTAGAGAGGTTTGCTTTAGTTATCCTACAAGACCAGATGAACTGATATTCAATGGATTTTCTCTTTCATTACCAAGCGGCACTACTGCAGCTTTGGTAGGGCAAAGTGGTAGTGGAAAATCCACAGTTGTTAGTTTGATAGAAAGATTCTATGATCCAACGGAAGGTGAGGTACTCATTGATGGTGTCAACCTCAAAGAATTTCAACTGAAATGGATCAGACAGAAAATAGGCCTAGTCAGCCAGGAACCCGTTCTCTTTACATGTAGCATTAAGGAGAATATTGCCTATGGCAAGGATGGTGCAACTGATGAAGAAATCAGAGTTGCAGCAGAACTTGCTAATGCTGCCAAATTTATAGATAAACTTCCTCAGGGACTTGACACAATGGTTGGTGAGCATGGAACACAGCTCTCTGGAGGTCAAAAGCAAAGAGTTGCAATTGCCAGAGCAATTTTGAAAGACCCAAGAATCCTACTTCTTGATGAAGCTACAAGTGCCCTTGACGCAGAATCTGAGAGAATTGTACAAGAGGCATTAGACAGAATAATGATAAACCGGACGACTATCGTTGTAGCTCACCGCTTAAGTACAATAAGAAATGTTGACACCATTGCTGTCATTCATCAAGGAAAAATAGTTGAAAGAGGTTCACATGCTGAGCTCACCAAAGATCCTAATGGAGCCTATAGCCAGCTTATTAGACTGCAAGAAATGAAGGGGTCAGAACAAAATGATACAAATGAGACAAACAAGTCAAACAATATAGTGCTATCTGAAAAACGATTAAGTCAAAGATCTTTATCCTCAAGATCTATAAGCCAAGTGTCATCTGGAAACAGTGGTCGTCACTCTTTCTCAGCATCTTATGTTGCACCCACAACTGATGGCTTCTTAGAAACTGCAGATGGTGGGCCTCAAGCTTCACCTTCAACAAATTCTTCACCACCAGAAGTGCCACTTTATCGCCTGGCATATTTTAACAAGCCGGAGATTCCAGTCTTATTGATGGGGACTATAGCTGCAGTGCTGCATGGAGCAATAATGCCCGTTATCGGGCTCTTGGTTTCTAAAATGATAAGTATTTTCTACAAACCAGCTGATGAACTTCGTCATGATTCAAAAGTTTGGGCATTAGTGTTTGTAGCGGTTGCTGTGGCATCATTACTCGTTATTCCATGTAGATTCTACTTTTTTGGCGTTGCTGGAGGTAAGTTGATCCAAAGGATCCGGAAAATGTGTTTTGAGAAAGTAGTTCACATGGAAGTAAGTTGGTTTGACGATGCTGAGCATTCAAGTGGAGCACTTGGAGCGAGGCTCTCCACTGATGCAGCATCAGTTAGAGCTCTGGTTGGGGATGCACTTGGTTTGCTGGTTCAAAATATTGCTACAACAATAGCTGGCTTGGTAATTGCTTTTCAAGCAAGCTGGCAGCTTGCTTTTATAGTCCTTGCTTTGGCGCCTCTATTAGGACTAAATGGATATGTGCAAGTAAAGGTCTTGAAAGGATTCAGCGCAGATGCAAAGAAATTGTATGAGGAAGCAAGTCAAGTGGCAAATGACGCTGTAGGGAGTATAAGAACTGTTTCTTCTTTTTGTGCTGAAGAGAAGGTGATGGAATTATATAAGCAAAAATGTGAGGGACCAATTAAGAAAGGAATAAGGCGGGGGATAATAAGTGGATTAGGTTTTGGGTCATCATTCTTCATGCTGTATTTAGTTGATGCCTGCATTTTTTATGCTGGAGCTCGACTTGTAGAGGATGGCAAATCTACGTTCTCAGATGTTTTCCTTGTCTTTTTTGCTCTCAGCATGGCAGCTATGGGAGTCTCCCAATCTGGGACCTTGGTCCCTGATTCAACTAATGCAAAAAGTGCTACTGCTTCCATATTTGCTATTCTTGATCAGAAGTCACAAATAGACCCTAGTGATGAATCTGGCACAACACTGGAAGAAGTCAAGGGAGAAATTGAGTTTAGCCATGTTAGTTTCAAGTATCCTACTAGACCTGATGTTCAAATATTCAAAGATCTTTGCTTGAACATTCATAGCGGCAAGACAGTTGCACTGGTTGGAGAAAGCGGAAGTGGAAAATCAACCGTGATCTCGTTACTACAAAGATTTTATGACCCCAACTCAGGACACATTACACTTGATGGAATAGAAATTCATAGGATGCAAGTGAAATGGCTAAGACAACAGATGGGACTGGTAAGCCAGGAGCCGGTTCTTTTCAATGACACGGTTCGAGCCAACATTGCATACGGAAAAGGCGGATATGCAACAGAAGCAGAAATTGTTGCTGCAGCAGAACTGGCAAATGCTCACCAGTTCATTAGTAGTTTGCAGAGGGGCTATGACACAATAGTAGGCGAGAGAGGAATTCAATTATCTGGGGGACAGAAGCAGCGTGTGGCAATCGCACGGGCTATAGTGAAGAATCCAAAAATACTATTACTAGATGAAGCAACTAGTGCACTTGATGCTGAGTCTGAAAAAGTGGTACAAAATGCACTTGACCGTGTTATGGTGGAGCGAACGACAATAATAGTAGCTCATAGGTTATCAACTATAAAGGGTGCAGATTTAATTGCAGTAGTTAAGAATGGTCTGATAGCAGAGAAAGGAAAACATGAAGCATTGCTCCATAAGGGTGGTGACTATGCTTCCTTAGTGGCATTGCACATGCACACAGGTGCTTCTACATCTTAG 3849 0.4154 MATDISLERDIASVQPVVDHDSKQDSEKSKDKDETTNTVPLYKLFSFADPSDCLLMLMGTVGAIGNGISIPLMMLLFGTMINAFGDSTNSKVVDEVSEVSLKFVYLAVGTFVASFLQLTCWMITGERQSARIRGLYLKTILRQDVSFFDTETSTGEVVGRMSGDTVLIKDAMGEKVGQFIQFVATFIGGFVIAFTKGWLLTVVMLSSLPPLILSGAMTSMVIAKASSTGQTAYSKSASVVEQTIGSIRTVASFTGEKQAITKYNQSLIKVYKTAVQEALASGVGFAILFFVFICSYGLAVWFGGKMIIEKGYTGGDVMTVIFSVLIGSTCLGQTSPSLSAFAAGQAAAFKMFETIKRKPEIDASDTTGRKLEEVRGDIELREVCFSYPTRPDELIFNGFSLSLPSGTTAALVGQSGSGKSTVVSLIERFYDPTEGEVLIDGVNLKEFQLKWIRQKIGLVSQEPVLFTCSIKENIAYGKDGATDEEIRVAAELANAAKFIDKLPQGLDTMVGEHGTQLSGGQKQRVAIARAILKDPRILLLDEATSALDAESERIVQEALDRIMINRTTIVVAHRLSTIRNVDTIAVIHQGKIVERGSHAELTKDPNGAYSQLIRLQEMKGSEQNDTNETNKSNNIVLSEKRLSQRSLSSRSISQVSSGNSGRHSFSASYVAPTTDGFLETADGGPQASPSTNSSPPEVPLYRLAYFNKPEIPVLLMGTIAAVLHGAIMPVIGLLVSKMISIFYKPADELRHDSKVWALVFVAVAVASLLVIPCRFYFFGVAGGKLIQRIRKMCFEKVVHMEVSWFDDAEHSSGALGARLSTDAASVRALVGDALGLLVQNIATTIAGLVIAFQASWQLAFIVLALAPLLGLNGYVQVKVLKGFSADAKKLYEEASQVANDAVGSIRTVSSFCAEEKVMELYKQKCEGPIKKGIRRGIISGLGFGSSFFMLYLVDACIFYAGARLVEDGKSTFSDVFLVFFALSMAAMGVSQSGTLVPDSTNAKSATASIFAILDQKSQIDPSDESGTTLEEVKGEIEFSHVSFKYPTRPDVQIFKDLCLNIHSGKTVALVGESGSGKSTVISLLQRFYDPNSGHITLDGIEIHRMQVKWLRQQMGLVSQEPVLFNDTVRANIAYGKGGYATEAEIVAAAELANAHQFISSLQRGYDTIVGERGIQLSGGQKQRVAIARAIVKNPKILLLDEATSALDAESEKVVQNALDRVMVERTTIIVAHRLSTIKGADLIAVVKNGLIAEKGKHEALLHKGGDYASLVALHMHTGASTS* 1283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g5018 1282 CDD ABC_6TM_Pgp_ABCB1_D1_like 56 339 - -
Mal5g5018 1282 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 715 1001 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal5g5018 1282 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1026 1273 IPR027417 -
Mal5g5018 1282 SMART AAA_5 1063 1256 IPR003593 -
Mal5g5018 1282 SMART AAA_5 405 591 IPR003593 -
Mal5g5018 1282 SUPERFAMILY ABC transporter transmembrane region 702 1020 IPR036640 GO:0005524|GO:0016021
Mal5g5018 1282 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 370 616 IPR027417 -
Mal5g5018 1282 ProSitePatterns ABC transporters family signature. 517 531 IPR017871 GO:0005524
Mal5g5018 1282 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 57 343 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal5g5018 1282 ProSitePatterns ABC transporters family signature. 1176 1190 IPR017871 GO:0005524
Mal5g5018 1282 MobiDBLite consensus disorder prediction 620 642 - -
Mal5g5018 1282 PANTHER - 24 1277 - -
Mal5g5018 1282 Gene3D - 1026 1274 IPR027417 -
Mal5g5018 1282 Gene3D - 368 617 IPR027417 -
Mal5g5018 1282 CDD ABC_MTABC3_MDL1_MDL2 378 616 - -
Mal5g5018 1282 MobiDBLite consensus disorder prediction 14 34 - -
Mal5g5018 1282 PANTHER ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL 24 1277 - -
Mal5g5018 1282 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1036 1273 IPR003439 GO:0005524
Mal5g5018 1282 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 378 614 IPR003439 GO:0005524
Mal5g5018 1282 Pfam ABC transporter transmembrane region 714 986 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal5g5018 1282 Pfam ABC transporter transmembrane region 56 328 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal5g5018 1282 CDD ABC_6TM_Pgp_ABCB1_D2_like 704 1019 - -
Mal5g5018 1282 Gene3D ABC transporter type 1, transmembrane domain 1002 1025 IPR036640 GO:0005524|GO:0016021
Mal5g5018 1282 Gene3D ABC transporter type 1, transmembrane domain 695 1001 IPR036640 GO:0005524|GO:0016021
Mal5g5018 1282 CDD ABC_MTABC3_MDL1_MDL2 1036 1271 - -
Mal5g5018 1282 Pfam ABC transporter 1055 1204 IPR003439 GO:0005524
Mal5g5018 1282 MobiDBLite consensus disorder prediction 1 34 - -
Mal5g5018 1282 Pfam ABC transporter 397 545 IPR003439 GO:0005524
Mal5g5018 1282 Gene3D ABC transporter type 1, transmembrane domain 43 635 IPR036640 GO:0005524|GO:0016021
Mal5g5018 1282 SUPERFAMILY ABC transporter transmembrane region 43 360 IPR036640 GO:0005524|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g5018 Mal-Chr5 123736534 123742358 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g5018 39 1277 Calmodulin-binding Proteins AT2G36910 43.904 0.0 1037
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g5018 5 123736534 123742358 Mal5g5018 5 123736534 123742358 ECH