Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g5011 ATGGTGATATTGAACATTGGGAAGAAGCAGAATGAGAAGAAGTTGCAGAGTGAAGAAGGAGTGAGACTTGGGAAATATGAGTTGGGTAGGATTCTTGGTGAGGGTAATTTTGGTAAAGTAAAGTTTGCTAGGAACACTGATTCTGGACAACCTTATGCTATTAAGATTATTGATAAGAACAAGATCATTGATCTCAATATCACCAACCAGATAAAGAGGGAAATAGGTGCCTTGAAGCTCCTAAGGCATCCCAATGTTGTTAAATTATACGAGGTCTTAGCTAGCAAAACAAAAATTTACATGGTACTTGAGTACGTGACAGGAGAGGAGTTATTTGACAAAATAGCTTCCAAGGGTAAACTTACTGAAGGTGAAGGTAGAAAATTGTTCCAGCAGTTGATTGATGGTGTAAGCTACTGTCACAGTAAAGGTGTCTTCCACAGGGATATCAAGCTTGAGAATGTACTTGTGGATGCCAAAGGGAATCTAAAGATAACTGATTTTGGCCTTAGTGCTTTACCACAACAATTTAGGGCAGATGGGTTGTTGCATACAACATGTGGAAGTCCAAATTATGTTGCACCAGAGATTCTTGCTAATAGGGGCTATAATGGTGCATCATCAGATGTATGGTCATGTGGTGTTATCTTGTATGTAGTCCTAACAGGATACCTACCTTTTGATGATAGAAATCTTGCAGTTCTATATCAGAAGGTTTTGAAAGGAGATTTTCAGAAACCAAAGTGGTTATCAGCTGGTGCACAAAACATTATAAAGAGGATTCTTGATCCCAACCCTGAAACCAGAATAACAATGGCGGGGATCAAAGAAGATTTGTGGTTCAAGGAAGGATATAATCAAGCAGATCCTGAGGACGAAGAAGAGGGTGTATACGTTGACGATCAAGCCTTTTCCGTCCATGAATTGTCACATGAAGAAGCAAAGAGGAGTTCAGAATCACCAATCCGTATCAATGCATTTCAGTTAATAGGGATGTCTTCATGCCTAGACCTCTCGGGGTTTTTTGAGAAAGAGGATGTATCTGAGAGGAAGATAAGGTTTACAACAAATCTCTCATCCAAAGATCTGATGGAGAAGATTGAAGATTCTGTGACAGAATTGGAATTTAGAGTTCAAAAGAAAAATGGCAAAATAAAAGTGATACAAGAGAACAAGGAGCATAAAACTCTTGGCAGCCTCTCAGTGACAATAGAGGTTTTTGAAATAAGTTCATCGTTGTATGTAGTAGAATTAAGCAAGTGTTATGGAGATGCCTCTGTATATAGACAGTTATACAAGAAGTTATTAAATGATCTGGGTGTTCCCCCAAGGAAAGCACTAGTGAGCTCAGAAGTGAAAATTGTAGAGTCATATTTGGAATGA 1383 0.3861 MVILNIGKKQNEKKLQSEEGVRLGKYELGRILGEGNFGKVKFARNTDSGQPYAIKIIDKNKIIDLNITNQIKREIGALKLLRHPNVVKLYEVLASKTKIYMVLEYVTGEELFDKIASKGKLTEGEGRKLFQQLIDGVSYCHSKGVFHRDIKLENVLVDAKGNLKITDFGLSALPQQFRADGLLHTTCGSPNYVAPEILANRGYNGASSDVWSCGVILYVVLTGYLPFDDRNLAVLYQKVLKGDFQKPKWLSAGAQNIIKRILDPNPETRITMAGIKEDLWFKEGYNQADPEDEEEGVYVDDQAFSVHELSHEEAKRSSESPIRINAFQLIGMSSCLDLSGFFEKEDVSERKIRFTTNLSSKDLMEKIEDSVTELEFRVQKKNGKIKVIQENKEHKTLGSLSVTIEVFEISSSLYVVELSKCYGDASVYRQLYKKLLNDLGVPPRKALVSSEVKIVESYLE* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g5011 460 SMART serkin_6 26 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g5011 460 ProSitePatterns Serine/Threonine protein kinases active-site signature. 145 157 IPR008271 GO:0004672|GO:0006468
Mal5g5011 460 SUPERFAMILY Protein kinase-like (PK-like) 22 315 IPR011009 -
Mal5g5011 460 ProSiteProfiles NAF domain profile. 319 343 IPR018451 GO:0007165
Mal5g5011 460 ProSitePatterns Protein kinases ATP-binding region signature. 32 55 IPR017441 GO:0005524
Mal5g5011 460 Pfam NAF domain 323 380 IPR004041 GO:0007165
Mal5g5011 460 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 17 449 - -
Mal5g5011 460 PANTHER SERINE/THREONINE KINASE 17 449 - -
Mal5g5011 460 Gene3D Phosphorylase Kinase; domain 1 9 105 - -
Mal5g5011 460 Coils Coil 454 460 - -
Mal5g5011 460 CDD CIPK_C 325 436 - -
Mal5g5011 460 Gene3D Kinase associated domain 1, KA1 318 441 - -
Mal5g5011 460 ProSiteProfiles Protein kinase domain profile. 26 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g5011 460 Pfam Protein kinase domain 26 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g5011 460 Gene3D Transferase(Phosphotransferase) domain 1 106 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g5011 Mal-Chr5 123648283 123653572 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g5011 89 449 CBL-interacting serine-threonine protein kinases AT3G17510 68.871 7.95e-175 493
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Mal5g5011 Pkinase 1.9e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g5011 K07198 - gmx:100777468 703.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g5011 5 123648283 123653572 Mal5g5011 5 123648283 123653572 ECH
Mal5g5011 5 123648283 123653572 Mal4g2808 4 80421670 80428707 PCT