Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g5004 ATGGCATCTGATCTGAGCTCGAGGTTGTCGAAGAAAACATCTGTTTTTGGGTTAGAAGCATGGGAATTAATGGGGCTAATAGTTGGATTGTTCATTGTAATCATTCTTCTGGTGATATCAATATGTCTTACTTCAAAAAAGAAATCTCGAAGAGTCAATGGCATGCTTCCCCTGAGCCATAGGTTATCCGTTTCAGAAGAGATCAAAGAGATTAAAATGGATCAGGTTTCAACGAATAGTCATCCCCAAAACGGTGCTTTTATGAGTCTTTATGACAAGTTCAATGACAAAGAATCTGAAAATATTTTGCTCCAAACAAAGAATGGGGAATATAGCAGCCAATCAGGCTCATTTGTTCATGTCGAGAAAGACGCTGCTGGCTCTCAATCAGGTGAAGAAAGCGGTGCTAAGTCCGTTTCTGCACACAGGCCTTCTTTAACTTCACCATCGCCTTTGTCTGGTCTTCCCGAGTTCTCTCACCTTGGCTGGGGACACTGGTTTACATTGAGGGACCTAGAACTTGCAACAAACAAGTTTTCAAAAGACAATATTATTGGTGAAGGAGGATATGGAGTTGTTTATCAAGGCCAGCTGATCAACGGGAATCCAGTGGCTATTAAAAAACTACTAAATAATCTTGGACAAGCTGAAAAGGAATTTAGAGTGGAAGTTGAGGCTATTGGTCATGTGAGGCACAAGAATTTGGTTAGACTTTTGGGTTTTTGCATTGAAGGCACTCACAGATTGTTGATTTATGAGTATGTTAACAATGGAAATTTAGAGCAATGGCTTCATGGTGCCATGCGGCAATATGGTTTTCTTACATGGGATGCTCGGATTAAAATTCTTCTTGGAACAGCTAAAGCGCTGGCTTACTTGCACGAGGCAATTGAGCCGAAAGTTGTCCATCGAGATATTAAGTCAAGTAATATTCTTATTGATGATGACTTCAATGCCAAAATATCTGACTTTGGACTAGCTAAGTTACTTGGTGCCGGAAAAAGTCACATTACAACTCGAGTAATGGGTACTTTTGGATATGTTGCTCCAGAATATGCCAATTCTGGCTTACTAAATGAGAAGAGTGATGTTTATAGCTTTGGCGTATTGCTCCTTGAAGCAATTACTGGAAGAGATCCAGTGGATTATAGCCGCTCAGCGGCTGAGGTAAATTTGGTTGACTGGCTGAAGATGATGGTAGGTAATAGGCACGCAGAAGAGGTGGTGGACCCAAACATTGAGACCAGACCGTCGACAAGTGCCCTTAAACGAGCCCTTTTGACTGCTTTGAGGTGTGTTGATCCAGATTCTGAGAAAAGACCAAAAATGAGTCAAGTGGTCCGCATGCTTGAATCAGAAGAATATCCCATACCTAGAGAGGATCGAAGACGCCGGAAGAGTAATGCTAGAAGTACTGATGTGGAGACGCAGAAGGAGAATTCTGATACAGATAAGAGTGATCATCCAGATTCCAAGCCCAACGGAAGAAGGAATCAAAGGAAGTAA 1506 0.417 MASDLSSRLSKKTSVFGLEAWELMGLIVGLFIVIILLVISICLTSKKKSRRVNGMLPLSHRLSVSEEIKEIKMDQVSTNSHPQNGAFMSLYDKFNDKESENILLQTKNGEYSSQSGSFVHVEKDAAGSQSGEESGAKSVSAHRPSLTSPSPLSGLPEFSHLGWGHWFTLRDLELATNKFSKDNIIGEGGYGVVYQGQLINGNPVAIKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGFCIEGTHRLLIYEYVNNGNLEQWLHGAMRQYGFLTWDARIKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDDDFNAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGLLNEKSDVYSFGVLLLEAITGRDPVDYSRSAAEVNLVDWLKMMVGNRHAEEVVDPNIETRPSTSALKRALLTALRCVDPDSEKRPKMSQVVRMLESEEYPIPREDRRRRKSNARSTDVETQKENSDTDKSDHPDSKPNGRRNQRK* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g5004 501 Gene3D Phosphorylase Kinase; domain 1 160 254 - -
Mal5g5004 501 Gene3D Transferase(Phosphotransferase) domain 1 255 467 - -
Mal5g5004 501 ProSitePatterns Serine/Threonine protein kinases active-site signature. 301 313 IPR008271 GO:0004672|GO:0006468
Mal5g5004 501 MobiDBLite consensus disorder prediction 122 151 - -
Mal5g5004 501 MobiDBLite consensus disorder prediction 131 151 - -
Mal5g5004 501 ProSiteProfiles Protein kinase domain profile. 179 456 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g5004 501 Pfam Protein kinase domain 180 448 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g5004 501 PANTHER OS01G0323000 PROTEIN 2 501 - -
Mal5g5004 501 MobiDBLite consensus disorder prediction 436 501 - -
Mal5g5004 501 SMART serkin_6 179 450 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g5004 501 CDD STKc_IRAK 185 451 - -
Mal5g5004 501 SUPERFAMILY Protein kinase-like (PK-like) 163 459 IPR011009 -
Mal5g5004 501 PANTHER RECEPTOR-LIKE KINASE PLANT 2 501 - -
Mal5g5004 501 ProSitePatterns Protein kinases ATP-binding region signature. 185 208 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g5004 Mal-Chr5 123593877 123596654 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g5004 17 453 Trihelix Transcription Factor Family AT1G70460 40.716 7.76e-95 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Mal5g5004 Pkinase 2.7e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g5004 - - gmx:100793499 852.818
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g5004 5 123593877 123596654 Mal5g5004 5 123593877 123596654 ECH
Mal5g5004 5 123593877 123596654 Mal4g2798 4 79999244 80003542 PCT