Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g5003 ATGGGTTGCTTTGGCTTCTGCAAAGAGAATGATGCTTATACTACTTCTGACAAAGGAATCTTCATGCAAACCAACCCTACCGGGAATTCTAGTTATCATGGCAGACACACGGCAGTAACTGTTCCTCGGCCTATAAATCTCCAACCTATTTCTGTCCCTTCCATTACAGTGGATGAATTGAGGTCTTTGACAGATAATTTTGGTTCAAAGACTTTCGTTGGTGAAGGTGCATATGGGAAAGTGTATCGCGCCACATTGAAAAATGGACGTGAAGTTGCAATTAAAAAGTTGGATTCCAGTAAGCAGCCAGACCAAGAATTTCTTTCTCAGGTGTCCATCGTATCAAGGCTAAAGCATGAAAACGTTGTTGAGCTTGTTAATTACTGTGTTGATGGTCCTTTGCGTGCCCTTGCGTATGAGTATGCTCCTAATGGATCCCTTCATGATATTCTACATGGACGCAAAGGTGTGAAGGGTGCAGAACCTGGTCAAGTTCTGTCATGGGCTGAAAGAGTTAAAATCGCTGTTGGAGCAGCCAGAGGACTTGAATATCTTCATGAAAAGGCAGAGGTTCATATTGTCCATCGTTACATTAAATCCAGTAACATACTTCTATTCGAGGACGGCGTTGCAAAGATTGCTGATTTTGATCTGTCGAATCAAGCCCCTGATGCTGCCGCACGTCTTCATTCTACCCGTGTTCTTGGAACCTTTGGTTATCATGCTCCAGAATATGCAATGACTGGAAACCTCTCTTCAAAGAGTGATGTTTACAGTTTTGGAGTTATACTGTTGGAACTCTTAACCGGGCGTAAACCTGTTGATCATACACTTCCCCGAGGACAGCAAAGCCTTGTGACTTGGGCAACACCAAAGCTTAGTGAAGATAAGGTGAAGCAGTGCGTTGATGTTAGATTAAAGGGAGAGTACCCTTCCAAGTCAGTTGCAAAGTTGGCTGCTGTCGCTGCACTGTGTGTTCAATATGAAGCTGAGTTTCGACCAAATATGAGCATCATTGTCAAAGCTTTACAGCCGCTAATGAATAATACTCGTTCTTCTCAACCAAGGGAACCACGCAACTTGTAA 1086 0.4337 MGCFGFCKENDAYTTSDKGIFMQTNPTGNSSYHGRHTAVTVPRPINLQPISVPSITVDELRSLTDNFGSKTFVGEGAYGKVYRATLKNGREVAIKKLDSSKQPDQEFLSQVSIVSRLKHENVVELVNYCVDGPLRALAYEYAPNGSLHDILHGRKGVKGAEPGQVLSWAERVKIAVGAARGLEYLHEKAEVHIVHRYIKSSNILLFEDGVAKIADFDLSNQAPDAAARLHSTRVLGTFGYHAPEYAMTGNLSSKSDVYSFGVILLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVKQCVDVRLKGEYPSKSVAKLAAVAALCVQYEAEFRPNMSIIVKALQPLMNNTRSSQPREPRNL* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g5003 361 SUPERFAMILY Protein kinase-like (PK-like) 47 343 IPR011009 -
Mal5g5003 361 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 1 355 - -
Mal5g5003 361 CDD STKc_IRAK 73 346 - -
Mal5g5003 361 Gene3D Phosphorylase Kinase; domain 1 33 141 - -
Mal5g5003 361 Pfam Protein tyrosine and serine/threonine kinase 72 343 IPR001245 GO:0004672|GO:0006468
Mal5g5003 361 ProSiteProfiles Protein kinase domain profile. 67 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g5003 361 Gene3D Transferase(Phosphotransferase) domain 1 142 359 - -
Mal5g5003 361 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 1 355 - -
Mal5g5003 361 PIRSF ILK 28 356 - -
Mal5g5003 361 ProSitePatterns Protein kinases ATP-binding region signature. 73 96 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g5003 Mal-Chr5 123590239 123592488 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g5003 48 355 Receptor kinase-like Gene Family AT4G02010 47.205 1.43e-89 282
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Mal5g5003 PK_Tyr_Ser-Thr 1.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g5003 K13436 - gmx:547595 629.402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g5003 5 123590239 123592488 Mal5g5003 5 123590239 123592488 ECH