Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g4993 ATGCCTCCATCAAAGTACCACTGCACTCACTCTCTCCCCAATGCTATCAAACAGAACCATCTTCCCCAACACCATCAAGTCGCACCCGGTGGTTACCTCGGTATAACAAACGCCTCCACATACGGTAACTCAACCAACCATGTTGTCGCCATTGAGCTTGACACGGTTAAACAAAGCTTTGACCCTGGCAGCAACCAAGTGGGACTCGGCTTTAACGGTGTCCATTCCAACGTTACAGTTCCTCTCAATTTGGAAATCTCTCCAAATGGAACTCAATTCTATGTTTTATGGATAAAATACAATGGAAACCGGAAAATAGTCAATGTTTACATGGCAGCGCAACCTTCATTGGATTTACCTATAGTTGCGAAACTGATTGAAGAGTTTACCGGGAACAACCAAAAGTTTCAATTTGAAGAATTGAAGAAAGCTACCAATAACTTTGATGAGAAATTGAAGCTTAGACAAGGTGGATTTGGTGTAGTTTATAAAGGAACATTGTCTGACAAGAAATTGGAAGTTGGTATCAAGATGTTTTGTAGAGATAAGATGAAAAGCACATATGCTTTCTTGGATGAGCTTACCATAATCAATCGCCTCCGACACAAAAATCTTGTTAAATTACAAGGTCAGTTTCTTTTATAA 645 0.4 MPPSKYHCTHSLPNAIKQNHLPQHHQVAPGGYLGITNASTYGNSTNHVVAIELDTVKQSFDPGSNQVGLGFNGVHSNVTVPLNLEISPNGTQFYVLWIKYNGNRKIVNVYMAAQPSLDLPIVAKLIEEFTGNNQKFQFEELKKATNNFDEKLKLRQGGFGVVYKGTLSDKKLEVGIKMFCRDKMKSTYAFLDELTIINRLRHKNLVKLQGQFLL* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g4993 214 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.5-RELATED 132 210 - -
Mal5g4993 214 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.5-RELATED 27 126 - -
Mal5g4993 214 SUPERFAMILY Protein kinase-like (PK-like) 129 213 IPR011009 -
Mal5g4993 214 Gene3D Phosphorylase Kinase; domain 1 136 213 - -
Mal5g4993 214 PANTHER - 132 210 - -
Mal5g4993 214 PANTHER - 27 126 - -
Mal5g4993 214 ProSiteProfiles Protein kinase domain profile. 148 214 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g4993 214 Gene3D - 15 135 - -
Mal5g4993 214 Pfam Protein tyrosine and serine/threonine kinase 153 211 IPR001245 GO:0004672|GO:0006468
Mal5g4993 214 SUPERFAMILY Concanavalin A-like lectins/glucanases 28 114 IPR013320 -
Mal5g4993 214 Pfam Legume lectin domain 23 113 IPR001220 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g4993 Mal-Chr5 123485938 123488205 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g4993 135 210 Receptor kinase-like Gene Family AT1G70110 44.737 4.70e-15 71.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Mal5g4993 Lectin_legB 7.1e-19 CL0004
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g4993 - - lja:Lj5g3v0528900.1 125.946