Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g4990 ATGTTTCCCATTGCTTACTTCACCGCCCTCATCTGCATTCTTTTCCTCTTCCCGACGACAACTTCCCCAGCTCAAAACCTTAAAACCGAAACTCACTTTTACGGACCCTTCAATTCCACCAACGCCAACCATTTTGATGTCATACATACGACATCTATCTACGAAGAAACCTTCCAGCTCACTCTAGACAGCACCGGAAGTGAAACGGTCATCTTCCTGTTTAACAATTTCGGTGGTTATCTCGGTACAACAAACGTCTCCACCGACGGTAACTCCACCAACCGTGTCGTCGCCATTGAGCGTGACACAGTTAAACAAAGCTTTGATCCTAACATCAACCACGTGGGACTCGACATTAACGGTGTACATTCCAAGTTAAATTGTGTGTTGAGATGGAATATTGCCATCGAGGTTTTTTATGAAAAGGATATTTCATTGACTATTGGTTTAGCGGTTGGTGGTCCTCTATTGGTGTTGCTTTTAATTGGTGCTGGATGTGGCTATTGGTATGTTTACAAGAAGAATAGTGAAAATGGTTTTGATTCGAAGATATTGGCAAGATTGAAGAGTAGGGCTGAGCACTGGGCGGCCCTATTGAAGAGTTTACCGGGAACAGCCAAAGGGTTTCAAATTAAAGAGTTGAAGAAAGTTACCAATAACTTTGATGAGAAATTGAAGCTTGGACAAGGTGGATTTGGTGTAGTTTATAAAGGAACATTGTTTGATAGGAAATTGGAAGTTGCTATCAAGTTGTTTTGTAGAGATAAGATGAAAAGCACAAATGCTTTCTTGGAAGATCATACCATCATCGATCGCCCCACACACAAATCTTGTTAA 837 0.4146 MFPIAYFTALICILFLFPTTTSPAQNLKTETHFYGPFNSTNANHFDVIHTTSIYEETFQLTLDSTGSETVIFLFNNFGGYLGTTNVSTDGNSTNRVVAIERDTVKQSFDPNINHVGLDINGVHSKLNCVLRWNIAIEVFYEKDISLTIGLAVGGPLLVLLLIGAGCGYWYVYKKNSENGFDSKILARLKSRAEHWAALLKSLPGTAKGFQIKELKKVTNNFDEKLKLGQGGFGVVYKGTLFDRKLEVAIKLFCRDKMKSTNAFLEDHTIIDRPTHKSC* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g4990 278 PANTHER - 121 276 - -
Mal5g4990 278 ProSitePatterns Protein kinases ATP-binding region signature. 227 250 IPR017441 GO:0005524
Mal5g4990 278 Gene3D - 19 178 - -
Mal5g4990 278 PANTHER - 74 124 - -
Mal5g4990 278 SUPERFAMILY Protein kinase-like (PK-like) 207 275 IPR011009 -
Mal5g4990 278 Pfam Legume lectin domain 76 135 IPR001220 GO:0030246
Mal5g4990 278 Gene3D Phosphorylase Kinase; domain 1 206 278 - -
Mal5g4990 278 SUPERFAMILY Concanavalin A-like lectins/glucanases 73 129 IPR013320 -
Mal5g4990 278 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.5-RELATED 121 276 - -
Mal5g4990 278 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.5-RELATED 74 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g4990 Mal-Chr5 123477388 123479321 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g4990 205 277 Receptor kinase-like Gene Family AT5G56890 42.466 9.82e-12 63.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Mal5g4990 Lectin_legB 1.4e-11 CL0004
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g4990 - - gmx:100784558 139.043