Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g4983 ATGGTTGCCGAAGCCGAATTTATATGTCAACAGAGCATTTCTATGTTAGATGTCAAGTATCACCTCTGCGTTGCTCAAGAACACAACGTCAAGGTTGAGGTTTCACCTACCTCTCCTACCCCTTCTATTCCAATCTTTGCCCATGCTGTGAGTTGCCCTGAGATCATTGAAGATTCAATAATCGAGACCTCTGAAAAGATGTTTATCCCAAACGTGTGTTCCGGTAGCTATGCTGATATTGGACCACGGGGATCAATGGATGATGAACATATTCTGATAGATGATCTAGCTTGCCACCTTGGATTTGTGTTCAAGTACCCGATACCAAGTGCGTTTTATGCAGTTTTTGATGGGCATGGAGGGCCAGATGCTGCTGCCTTTGTTAAGAGGAATGCAATGAAATTATTTTTTGAAGATGCTGACATGCTTCAATCTTATGATACTGATGAGTTTTTTCTAGAGAAGTTGGAGGATTCTCACCGGAGAGCTTTTATACGGGCAGATCTTGCCTTGGCTGATGAGGAGAGTGTTAGTAGTTCATGTGGGACTACAGCACTGACTGCCCTTGTACTTGGAAGACATTTACTTGTTGCGAATGCTGGTGACTGTCGAGCAGTACTTTGCAGGAGAGGTACAGCTGTTGAAATGTCTCAAGATCACAAGCCTAGTTATTTACCAGAACGAAGGAGAGTAGAGGAATTAGGCGGCTTCATTGATGACGGATATCTCAATGGTTACCTCTCAGTAACCCGTGCCCTTGGGGATTGGGACTTAAAATTTCCACTTGGTGCTGCATCTCCTCTTATTGCCGAGCCTGATGTTCAACTGGTTACATTGACAGAAGAGGATGAGTTCTTGATCATTGCGTGTGATGGGATTTGGGATGTAATGTCTAGCCAAGTTGCTGTTAGTTTTGTTCGCCGTGGATTACGAAGGCACGGCGACCCACAGCAAAGTGCAAGAGATCTAGTCAAGGAAGCATTGCGCCTAAATACATCAGATAATCTCTCTGTGATTGTTATATGTTTGTCTCCTGTTGAAAAATTTGCTGAATCATGTCCGCCCCAAAGGCGAAGATTCAAAGCCTGCAGTATTTCTGAAGAGGCTCGTAATAGATTGAAGAGCTTGATAGAGGGAAATTGA 1143 0.4383 MVAEAEFICQQSISMLDVKYHLCVAQEHNVKVEVSPTSPTPSIPIFAHAVSCPEIIEDSIIETSEKMFIPNVCSGSYADIGPRGSMDDEHILIDDLACHLGFVFKYPIPSAFYAVFDGHGGPDAAAFVKRNAMKLFFEDADMLQSYDTDEFFLEKLEDSHRRAFIRADLALADEESVSSSCGTTALTALVLGRHLLVANAGDCRAVLCRRGTAVEMSQDHKPSYLPERRRVEELGGFIDDGYLNGYLSVTRALGDWDLKFPLGAASPLIAEPDVQLVTLTEEDEFLIIACDGIWDVMSSQVAVSFVRRGLRRHGDPQQSARDLVKEALRLNTSDNLSVIVICLSPVEKFAESCPPQRRRFKACSISEEARNRLKSLIEGN* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g4983 380 SMART PP2C_4 63 341 IPR001932 -
Mal5g4983 380 CDD PP2Cc 74 343 IPR001932 -
Mal5g4983 380 ProSitePatterns PPM-type phosphatase domain signature. 112 120 IPR000222 GO:0043169
Mal5g4983 380 Gene3D - 58 349 IPR036457 -
Mal5g4983 380 ProSiteProfiles PPM-type phosphatase domain profile. 73 343 IPR001932 -
Mal5g4983 380 SUPERFAMILY PP2C-like 64 345 IPR036457 -
Mal5g4983 380 PANTHER PROTEIN PHOSPHATASE 2C-LIKE PROTEIN 1 367 - -
Mal5g4983 380 SMART PP2C_SIG_2 88 343 IPR001932 -
Mal5g4983 380 Pfam Protein phosphatase 2C 83 335 IPR001932 -
Mal5g4983 380 PANTHER PROTEIN PHOSPHATASE 2C 1 367 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g4983 Mal-Chr5 123360684 123362298 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g4983 1 379 PP2C-type Phosphatase Gene Family AT1G48040 55.725 1.07e-145 416
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g4983 K14803 - gmx:100775577 645.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g4983 5 123360684 123362298 Mal5g4983 5 123360684 123362298 ECH