Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g4943 ATGGCTATGAAGTTAGTAATATTATTGTGTCTAGTGATACTCAAGTTCACTTCAGCATTTGCAACCACAGTGAATGAAGGCTATGGTGGTGGTGATACAGATACTGGCTGTCCATTAGGGACTGACATATACCAATACTCTTGCCCTGAAGCAGAGGCCATAATCTTCTCTTGGGTGGAACAAGCTGTCTCTAGTGATCCAAGAATGGCTGCTTCATTGCTGAGGCTTCACTTTCATGATTGCTTTGTCAATGGCTGTGATGCTTCAGTCTTGCTGGATGACACAGAAAACTTCGTTGGTGAGAAAACTGCTGCTCCAAACGTGAATTCGCTTAGAGGATTTGATGTAATCAATGAAATAAAATCTGAACTAGAACTAGTTTGTCCACAAACTGTTTCTTGTGCTGACATACTAGCAACTGCTGCTCGAGATTCGGTTCTTCTGTCAGGAGGACCAACTTGGGAGGTGCAAATGGGAAGAAAAGATAGTATAACGGCTAGCAAGACAGGAGCAAATAATAACATTCCAGGCCCAAACTCAACTGTTGATGTACTAGTGTCCAAGTTTGAAAACGTTGGCCTTACACTTCAAGACATGGTTGCCCTCTCAGGTGCACACACAATAGGAAAAGCCCGCTGCTCAACATTTAGCTCTCGCTTACAAAGAAACAGCATCTCAGACGGTCCATATGTTAATGTTGAATTTGTATCATCATTGCAACAGTTGTGCTCAGGACACGATAATAGCAACCGAATTGCGCATCTTGACCTGGCTACGCCAGCTACGTTTGATAACCAGTACTATATTAATCTTCTCGCTGGGGAAGGATTGCTTCCATCAGACCAAACTTTGGTGAATGGGAATGATCAGACACGACAGATTGTCGAAACCTATGTGGCGAACGCATTCATTTTCTTTGAGGACTTCAAGAATTCAATGGTAAAAATGGGAAGCTTGGGATCAGCTACGCAGAGTAACGGGCAGATTCGCAGGGACTGCCGAACTATTAATTAA 1014 0.432 MAMKLVILLCLVILKFTSAFATTVNEGYGGGDTDTGCPLGTDIYQYSCPEAEAIIFSWVEQAVSSDPRMAASLLRLHFHDCFVNGCDASVLLDDTENFVGEKTAAPNVNSLRGFDVINEIKSELELVCPQTVSCADILATAARDSVLLSGGPTWEVQMGRKDSITASKTGANNNIPGPNSTVDVLVSKFENVGLTLQDMVALSGAHTIGKARCSTFSSRLQRNSISDGPYVNVEFVSSLQQLCSGHDNSNRIAHLDLATPATFDNQYYINLLAGEGLLPSDQTLVNGNDQTRQIVETYVANAFIFFEDFKNSMVKMGSLGSATQSNGQIRRDCRTIN* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g4943 337 Gene3D Peroxidase, domain 2 176 317 - -
Mal5g4943 337 SUPERFAMILY Heme-dependent peroxidases 39 337 IPR010255 GO:0004601|GO:0006979|GO:0020037
Mal5g4943 337 Pfam Peroxidase 59 300 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mal5g4943 337 Gene3D - 44 337 - -
Mal5g4943 337 PRINTS Haem peroxidase superfamily signature 132 149 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mal5g4943 337 PRINTS Haem peroxidase superfamily signature 70 84 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mal5g4943 337 PRINTS Haem peroxidase superfamily signature 150 162 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mal5g4943 337 PRINTS Haem peroxidase superfamily signature 256 271 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mal5g4943 337 PRINTS Haem peroxidase superfamily signature 198 213 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mal5g4943 337 PANTHER PEROXIDASE 40 12 336 - -
Mal5g4943 337 ProSitePatterns Peroxidases proximal heme-ligand signature. 198 208 IPR019793 -
Mal5g4943 337 ProSiteProfiles Plant heme peroxidase family profile. 38 337 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mal5g4943 337 CDD secretory_peroxidase 39 334 IPR033905 GO:0004601|GO:0042744
Mal5g4943 337 ProSitePatterns Peroxidases active site signature. 70 81 IPR019794 GO:0004601
Mal5g4943 337 PANTHER PEROXIDASE 72-RELATED 12 336 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mal5g4943 337 PRINTS Plant peroxidase signature 72 92 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mal5g4943 337 PRINTS Plant peroxidase signature 311 324 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mal5g4943 337 PRINTS Plant peroxidase signature 131 141 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mal5g4943 337 PRINTS Plant peroxidase signature 254 269 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mal5g4943 337 PRINTS Plant peroxidase signature 270 287 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mal5g4943 337 PRINTS Plant peroxidase signature 150 165 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mal5g4943 337 PRINTS Plant peroxidase signature 48 67 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mal5g4943 337 PRINTS Plant peroxidase signature 112 125 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mal5g4943 337 PRINTS Plant peroxidase signature 197 209 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g4943 Mal-Chr5 123010947 123012557 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g4943 29 337 Peroxidase AT4G16270 63.009 1.18e-141 403
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g4943 K00430 - gmx:100787637 550.821
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g4943 5 123010947 123012557 Mal5g4943 5 123010947 123012557 ECH