Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g4935 ATGACATCACCATCTACTACAATACCAAACCTAGTAACAAACACAGACATATCACGTGACACAAGAAGAAGAAATAAAAGAAGGAACAAGACACAGAAACATCATCAACAAGATCAAATTCAGAGCCACCACAAATGGAAATCACAAGCACAACAACAAATCTATTCCTCCAAACTCCGTCAAGCCTTAACCAGAGTCAACTCTTCATCAACTCTGCGCAGAGGAAAAGCCGTCCGAGAAGCTGCAGACAGAGCTCTCGCTACGACGGCTAAAGGGAGAACTCGATGGAGCCGGGCCATTCTAATGACCCGGCTCAAGATCAAGTTTAGGAAGAAGAAACCTCATAGGGTGACCGCGTTGCCGTCAACGCGGTCAAAGAAGTCAAGGGTCAACGTTTTAAGGTTGAAGGGGAAGGTGATTATTCCTAGTGTGCAGAGGAAAGTAAGGTTCCTTGGAGGGTTAGTTCCTGGTTGCAAGAAGGAACCATTACCAGTGATTCTTGAAGAAGCTATTGATTATATACCTGCTCTTGAGATGCAGGTTCGAGCCATGAGTGCTCTTTTTAACCTTCTTTCTGCTTCTACCTCCGGCGCCAGTTCCGGTTGA 606 0.4554 MTSPSTTIPNLVTNTDISRDTRRRNKRRNKTQKHHQQDQIQSHHKWKSQAQQQIYSSKLRQALTRVNSSSTLRRGKAVREAADRALATTAKGRTRWSRAILMTRLKIKFRKKKPHRVTALPSTRSKKSRVNVLRLKGKVIIPSVQRKVRFLGGLVPGCKKEPLPVILEEAIDYIPALEMQVRAMSALFNLLSASTSGASSG* 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g4935 201 CDD bHLH_AtIBH1_like 138 187 IPR044549 GO:0006355
Mal5g4935 201 MobiDBLite consensus disorder prediction 20 52 - -
Mal5g4935 201 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 18 199 IPR044660 GO:0006355
Mal5g4935 201 PANTHER MYC-TYPE, BASIC HELIX-LOOP-HELIX (BHLH) DOMAIN-CONTAINING PROTEIN-RELATED 18 199 - -
Mal5g4935 201 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 148 193 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g4935 Mal-Chr5 122877058 122877663 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g4935 43 197 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G06590 54.598 9.41e-49 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g4935 - - gmx:100803765 230.335
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g4935 5 122877058 122877663 Mal5g4935 5 122877058 122877663 ECH
Mal5g4935 5 122877058 122877663 Mal4g3803 4 111162604 111163251 PCT