Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g4931 ATGTATCATGCAACAAAGCTACTTTCAGGGCAAATTTTTGAAGATGATGAATATACGAATTCTTTAACATTTCAAGATCATCAACATGAACCCTTGCCTCAAGTCAATAGCATTGATGAACGGATTCCTTTTGAAGGGCAAATATTTGAAACTCAAGAAGATGCTTATGAATTTTATTGTTTATTTTCTAAAAGAAATGGATTTTCTATTAGGCGTCATCACATTTATAAATCTCGTAAAAACGAGTCTAAAGAGAATCCATCGGGTGTTTATAAAAGGGAATTTGTTTGTCATCGTGGTGGTGTTGGTAAACCACGCAAAACTGTTGAAGTGGGAAGTCAAAGGAAACGAAAATCTTCAAGATGTGATTGTAGTGCAAAGATGTTGGTTGCTAAGAGAACAATTGGCTTTGAGGAAAAATCGGTGGTTAAATATTTCAACAACTATGAGATTCTCATTTAA 462 0.3377 MYHATKLLSGQIFEDDEYTNSLTFQDHQHEPLPQVNSIDERIPFEGQIFETQEDAYEFYCLFSKRNGFSIRRHHIYKSRKNESKENPSGVYKREFVCHRGGVGKPRKTVEVGSQRKRKSSRCDCSAKMLVAKRTIGFEEKSVVKYFNNYEILI* 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g4931 153 Pfam FAR1 DNA-binding domain 57 145 IPR004330 -
Mal5g4931 153 PANTHER PROTEIN FAR1-RELATED SEQUENCE 11 20 142 - -
Mal5g4931 153 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 20 142 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g4931 Mal-Chr5 122783860 122784592 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mal5g4931 FAR1 5.4e-12 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g4931 - - ccaj:109802755 177.948