Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g4920 ATGATGGGAATTGAAGAAAGAGAGAAAGCGGTGAAGAAGAAGATCCAAGAACTAGAAGAAGGACATGCTTACATGAAACAAGAAATGTCAAAGCTTAAACTTAGTGATGGAAGAGAACAACAACAACATCATCATCATCATCATCGTCAAAGGTCTCACTCTGTGTCTCCTCAACGTTCTAGATTGGGTTCTTGGAACAAAGGTTCTTGTTCTTTCAAACACTCTTCACCTCTCAGAAAGGAAACTCATGCTCACGCGCTTGTTAATTTTACTGAAAAACATTATCTCAATATTTTGCACTCTTTGGGACATTCTCTTCATATTTTGGATCTTAACTCTCGTATCATTTACTGGAACCGTAGTGCTGAAAATCTATACGGTTATGCAGCAGATGAAGTTTTGGGACAGGATGGGATTGATTTGCTTGTGGACTCTAGGGATTGGGGATTAGCTTATGATACAGTGAATTGTGTTATGAAGGGAGAGAGATGGAGTGGTCAATTCCTAGTCAAGAACAAGAAAGGAGAAAGATTTTTAGCTGTAACAACTAAGACTCCTTTTTATGATGATGGAAGTTTAGTTGGGATTATCTGTGTGTCGAGTGATTCGCGGCCGTTTCTTGAAATGAGAGCTCCATTCTTTGATGTAAAGAAGGCTGAATCGGATTATGGTTCTATGCGTCGTAGCAGTGGTGTTTCAAATAAACTTGGCTTTGACTCTCAGCAGCCACTACAAACTGCTCTAGCATCTAAAATTTCAAATTTGGCGTCGAAGATGGGTAACAAAGTTAAATCGAAGATCTGGACGGGAGAAAATAATGTGGATCGTGAAGATGGGAATGGAGAAAGTCAACATTCTGAACTTGGTTTCTCAGAACATAGAGAAGATGCTAATTCAAGCGGAGTTAGCACACCTAAAGGTGATTTGCCACAGTCCCCTGTTGGTGTATTTTATCGTGTTGAGGAAAAGGTTGAAGCAAAAACTTTGAGAGACTCTGGTGATGAGAGTGAAGGAAAACCTGTTAACAAAATTTTACATACCAAGGCTGAAGCCTGGATTCAAAAGAAAACATCAACGTGGCCATGGAGAACAAATGATCGAGAAGAATCGGAGGCAAGGAACGTTCATGCTGCTGAGCCGTGGAGGCAGAATGATCAAGAAAATGAGTCAATTAATCAGAAGATTATTTCTTCTGGCTTGAAGCACGAAAGCCAGGCTGGTGAAAGTAATCACCCTACTAACAATGAGGCTCCATTATCCCGTTCTTCCTCCTATAATGTTAACAGCACAAGTAGTGCCAGCAGCTGTGGGAGTGCTGGCAGTGGTGCTGTCAGTAGTAAAGTGGATGCAGACAATGATTGCTTGGATTATGAAATTTTATGGGAGGATTTAGCAATTCGAGAACAAATTGGACAGGGTTGTTGTGGAACTGTATACCATGCTCTGTGGTATGGATCGGATGTTGCTGTCAAGGTTTTCTCAAAGCAAGAGTATTCAGATGATTTGATACTATCCTTCAGACAAGAGGTATCTGTCATGAAAAGACTTCGGCACCCAAATATTCTTCTCTTTATGGGAGCAGTGACTTCACCCCAACGTCTCTGCATTGTGACAGAGTTTCTCCCGCGCGGAAGCTTGTGTCGCTTGTTACACCGAAACACACCCAAACTTGACTGGAGACGACGAGTTCATATGGCCTTGGATATTGCACGAGGCGTAAATTATCTTCATCATTATAACCCGCCTATCATCCATAGAGATTTGAAATCCTCAAATCTTCTAGTTGATAAGAATTGGACTGTGAAGGTTGGTGATTTTGGTCTTTCACGTCTTAAGCATGAAACATATCTCACAACTAAGACAGGAAGGGGCACGCCTCAATGGATGGCACCAGAAGTTCTTCGTAATGAACCATCAGATGAGAAGTCTGATGTGTACAGCTTTGGGGTGATATTATGGGAACTTGCGACTGAAAAGATTCCTTGGGATAATCTCAACCCAATGCAGGTAATTGGAGCTGTAGGGTTCATGAATCAGCGTCCAGAAATTCCAAAAGATGTTGATCCAGGGTGGGCTTCTTTAATTGAGATCTGTTGGCACAGTGATCCAACTTGTCGACCAACTTTCCCAGAACTGCTCGAAAGGCTTAGAGAGTTGCAAAAACAATATGTCATTCAGTTCCAGGCAGCCCGATCTGCTAGTGGGGAAAGCATCCTAAGAAAGGAGTCCTAG 2232 0.4194 MMGIEEREKAVKKKIQELEEGHAYMKQEMSKLKLSDGREQQQHHHHHHRQRSHSVSPQRSRLGSWNKGSCSFKHSSPLRKETHAHALVNFTEKHYLNILHSLGHSLHILDLNSRIIYWNRSAENLYGYAADEVLGQDGIDLLVDSRDWGLAYDTVNCVMKGERWSGQFLVKNKKGERFLAVTTKTPFYDDGSLVGIICVSSDSRPFLEMRAPFFDVKKAESDYGSMRRSSGVSNKLGFDSQQPLQTALASKISNLASKMGNKVKSKIWTGENNVDREDGNGESQHSELGFSEHREDANSSGVSTPKGDLPQSPVGVFYRVEEKVEAKTLRDSGDESEGKPVNKILHTKAEAWIQKKTSTWPWRTNDREESEARNVHAAEPWRQNDQENESINQKIISSGLKHESQAGESNHPTNNEAPLSRSSSYNVNSTSSASSCGSAGSGAVSSKVDADNDCLDYEILWEDLAIREQIGQGCCGTVYHALWYGSDVAVKVFSKQEYSDDLILSFRQEVSVMKRLRHPNILLFMGAVTSPQRLCIVTEFLPRGSLCRLLHRNTPKLDWRRRVHMALDIARGVNYLHHYNPPIIHRDLKSSNLLVDKNWTVKVGDFGLSRLKHETYLTTKTGRGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNPMQVIGAVGFMNQRPEIPKDVDPGWASLIEICWHSDPTCRPTFPELLERLRELQKQYVIQFQAARSASGESILRKES* 744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g4920 743 SUPERFAMILY Protein kinase-like (PK-like) 454 716 IPR011009 -
Mal5g4920 743 MobiDBLite consensus disorder prediction 267 313 - -
Mal5g4920 743 SUPERFAMILY PYP-like sensor domain (PAS domain) 91 202 IPR035965 -
Mal5g4920 743 Coils Coil 1 21 - -
Mal5g4920 743 MobiDBLite consensus disorder prediction 269 294 - -
Mal5g4920 743 ProSitePatterns Serine/Threonine protein kinases active-site signature. 583 595 IPR008271 GO:0004672|GO:0006468
Mal5g4920 743 MobiDBLite consensus disorder prediction 363 447 - -
Mal5g4920 743 TIGRFAM sensory_box: PAS domain S-box protein 92 202 IPR000014 -
Mal5g4920 743 MobiDBLite consensus disorder prediction 30 67 - -
Mal5g4920 743 Gene3D PAS domain 104 205 - -
Mal5g4920 743 ProSiteProfiles Protein kinase domain profile. 464 724 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g4920 743 ProSiteProfiles PAS repeat profile. 91 162 IPR000014 -
Mal5g4920 743 MobiDBLite consensus disorder prediction 384 442 - -
Mal5g4920 743 CDD PAS 108 202 IPR000014 -
Mal5g4920 743 Gene3D Phosphorylase Kinase; domain 1 457 541 - -
Mal5g4920 743 CDD STKc_MAP3K-like 470 716 - -
Mal5g4920 743 SMART serkin_6 464 724 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g4920 743 Pfam PAS fold 94 200 IPR013767 GO:0006355
Mal5g4920 743 PANTHER SERINE/THREONINE-PROTEIN KINASE DDB_G0282963 ISOFORM X1-RELATED 34 738 - -
Mal5g4920 743 SMART pas_2 93 160 IPR000014 -
Mal5g4920 743 Gene3D Transferase(Phosphotransferase) domain 1 543 730 - -
Mal5g4920 743 PRINTS Tyrosine kinase catalytic domain signature 687 709 IPR001245 GO:0004672|GO:0006468
Mal5g4920 743 PRINTS Tyrosine kinase catalytic domain signature 643 665 IPR001245 GO:0004672|GO:0006468
Mal5g4920 743 PRINTS Tyrosine kinase catalytic domain signature 577 595 IPR001245 GO:0004672|GO:0006468
Mal5g4920 743 PRINTS Tyrosine kinase catalytic domain signature 624 634 IPR001245 GO:0004672|GO:0006468
Mal5g4920 743 PRINTS Tyrosine kinase catalytic domain signature 538 551 IPR001245 GO:0004672|GO:0006468
Mal5g4920 743 Pfam Protein tyrosine and serine/threonine kinase 465 716 IPR001245 GO:0004672|GO:0006468
Mal5g4920 743 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 34 738 - -
Mal5g4920 743 MobiDBLite consensus disorder prediction 363 383 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g4920 Mal-Chr5 122647884 122653955 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g4920 13 743 MAP Kinase Kinase Kinase AT3G06620 55.943 0.0 837
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Mal5g4920 PK_Tyr_Ser-Thr 1.2e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g4920 - - gmx:100800867 1068.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g4920 5 122647884 122653955 Mal5g4920 5 122647884 122653955 ECH
Mal5g4920 5 122647884 122653955 Mal4g3793 4 111074655 111081162 PCT