Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g4882 ATGATTCCGCTTCTTCGAAACCACCGCAGCTTCATCTTCGTCATCGTCGCAATAATCTTGGTTGCAACGACGACGTTTTCCGATGCTCAAGAATCTTGCAACGGCATTCTGATCTCGTACTCCACCGCCGTCGGAATACAACTACCGCCGAACTTAACCGATTCTAACAAACAAGCCTATCGATTCGAGTCGACGTTGAGCTTGCTCAACAACGGAGCCGACGAACTCAAGTCATGGAAAGTCTTCGTCGGTTTTCAGCACGACGAGTATTTGGTTTCCGCTTCAAATGCTGTACTCGCGGACGGTACTACCCTCCCTGCTACCGTTGGAAACGGAACTGTTTTTTCTGGATTTCCACAGACGGATCTGAAGACTGCTGTTCAAACGGCGGGTGACTTGACGCAGATGCAGGCTCAGATCAGCCTTGTTGGGAGTGTTTTTGGTGTGGCGCCGCCGGATGTTCCGTTGCCCAAGTCAATCAATCTTGAAAATGATGGATTCATATGCAAAGCCTCTGGTCAAGGAGGAAAGAATGGGACCAGTATGTGCTGCACAAGAGATCCGAAGTTCAAGTCCAACATCACTACAGCTGAAAAGTTTCTGCCGCGTCAGAATGGTGATCTAACTATCATGTATGATGTGATTAGATCCTATGATTCAAACTATTGGGCAGAAGTTGTTATTGGTAATCATAATCCTATTGGAAGGCTTGATAATTGGAGGTTGAGCTGGGACTGGATGAATGATGAGTTTATATTTACTATGAAAGGTGCTTATCCATCTGTTCTGGATGCTTCTGGTTGTATTTTTGGCAAGCAAGGTACATACTACAAGGATCTTGACTTTGCTAATGTATTGAATTGTGAGAGGAGGCCTACCATTGTTGATCTTCCTCCTACTAAGTTCAATGATACCGATATTGGAAAAATTCCTTCTTGTTGCCGGAATGGTACTATATTGCCGCAATCTATGGACCCTAGCAAGTCTATTTCCAGATTCCAAATGCAGGTATACAAAATGCCGCCGGTGCTTAACCGATCCGAGCTTTCACCGCCGCAGAACTGGAAGATTAGTGGTTCGCTTAACCCTGACTACAGATGCGGTCCTCCAGTTCGTGTTAGTCCTACCCAGAATCCAGATCCAACAGGGTTGCCGTTAAACAAAACCGTGATGGCAAGTTGGCAGGTTGTATGTAACATTACAACAGCCAAGGGAACACCAAATAAATGCTGTGTCTCATTTTCGTCTTACTACAATGGATCAGTTATTCCATGCAACACATGTGCATGTGGATGCCCCAAGAATACAGAAAATACGTGTAGTACTACTGAACCTGCTATGTGGCTTCCCTCGGATGCAGTCCTTGTTCCTTTCGTGAATCGGAGTGCCAAGGCTGCTGCGTGGGCAAGTCTCAAACATCTACCAATCCCAAATCCACCGCCCTGCGGTGATAATTGCGGTGTGAGCATCAACTGGCATTTATTGTCAGATTATAATAAAGGGTGGAGTGCAAGGGTCACACTTTTCAATTGGGGTGAGACTAATTTTGCAGACTGGTTTGCTGCTGTGCAAATGGACAAAGCAGCTGCAGGTTTTGAGAAAATGTATTCATTCAATGCAAGCACCATAGAGATAGATGGCGTGAATAATACGATAATAATGCAAGGTTTGGAGGGATTGAACTACCTTGTTGCAGAAACAAATGGACCTAACCCTCGGACAGATCCTAGGGTACCTGGGAAACAACAGTCAGTAATCTCATTCACAAAGAAAACTACTCCTGGAATAAGTGTTGTTCGTGGTGACGGATTTCCCACAAAAGTCTTCTTCAATGGGGAGGAATGTTCTCTTCCTTCTGTATTTCCAACCAGTGGTGCTTCCAGGAAGGAATTTTCCTTTGCTACTTTGATGCTTCTACCATTGTTGTTAGTCGTCTTCTTATGGTAG 1947 0.4499 MIPLLRNHRSFIFVIVAIILVATTTFSDAQESCNGILISYSTAVGIQLPPNLTDSNKQAYRFESTLSLLNNGADELKSWKVFVGFQHDEYLVSASNAVLADGTTLPATVGNGTVFSGFPQTDLKTAVQTAGDLTQMQAQISLVGSVFGVAPPDVPLPKSINLENDGFICKASGQGGKNGTSMCCTRDPKFKSNITTAEKFLPRQNGDLTIMYDVIRSYDSNYWAEVVIGNHNPIGRLDNWRLSWDWMNDEFIFTMKGAYPSVLDASGCIFGKQGTYYKDLDFANVLNCERRPTIVDLPPTKFNDTDIGKIPSCCRNGTILPQSMDPSKSISRFQMQVYKMPPVLNRSELSPPQNWKISGSLNPDYRCGPPVRVSPTQNPDPTGLPLNKTVMASWQVVCNITTAKGTPNKCCVSFSSYYNGSVIPCNTCACGCPKNTENTCSTTEPAMWLPSDAVLVPFVNRSAKAAAWASLKHLPIPNPPPCGDNCGVSINWHLLSDYNKGWSARVTLFNWGETNFADWFAAVQMDKAAAGFEKMYSFNASTIEIDGVNNTIIMQGLEGLNYLVAETNGPNPRTDPRVPGKQQSVISFTKKTTPGISVVRGDGFPTKVFFNGEECSLPSVFPTSGASRKEFSFATLMLLPLLLVVFLW* 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g4882 648 PANTHER COBRA-LIKE PROTEIN 7 6 646 - -
Mal5g4882 648 Pfam COBRA-like protein 222 401 IPR006918 GO:0010215|GO:0031225
Mal5g4882 648 PANTHER COBRA-LIKE PROTEIN 7 6 646 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g4882 Mal-Chr5 122048266 122050919 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g4882 33 632 COBRA Gene Family AT4G16120 65.116 0.0 842
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g4882 - - gmx:100803929 1073.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g4882 5 122048266 122050919 Mal5g4882 5 122048266 122050919 ECH
Mal5g4882 5 122048266 122050919 Mal4g3732 4 109788266 109790608 PCT