Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g4873 ATGGCGGCTTCAGCAGACATCAGAGGCATTTTAACCGCTTTCAATCCTTCTCTCGACTTCTTCGCCATATCCACCGGTGACGGTCGCATTAAGATATGGGATGCTCTCAAGGGTCAAGTTCAAACCGAGTTTGCAGATATTTCTTCAACTCATCAAACCAATATATTTGATCAAAAAGGACATCTTTCTGTTGATTATACTTGTATCAAGTGGTTGTCTTTTCAAACAAAGAAGAAAAGGAAACATTCATCCTCTTTGTTAGTGCTTGGAACTGGTAGTGGTGATGTTTTAGCACTTGATGTTTCTGCTGGTCAATTGTCTTGGAAAATTGATGATTGTCATCCTGGAGGTGTCAGAGCCATTTCGTCTTTGGCAAATGGATCAACCTTTTATACTGCAGGCGCGGATGGAATGATATGTGCGATAGATTTCACGACAGGAAACCTGTTGGAGAAATTTAAAGCCTCTTCAAAGGCAGTATCTTGTATATCAGTTTCTCCAGATGGGAAGAAGTTAGCTACTGCAGCAGCACAATTGAAGATTTTCAATTGTTCTAATAAAAAAAAGATTCAAAAATGCTCTGGTCATCCTGGATCTGTCCGGTCTATGGTCTTCACTGAAGATAGCAAGTATATCCTCTCATCTGCTGTTGGTGAAAGATATGTTGCTGTTTGGAAGATAGATGGCACCAAAAAGCAGTCAGCTAGTTGTGTTCTTGCAATGGAACACCCTGCTGTTTTTCTTGATAGTAGGTGCATTGATAAAGGAGAACATGATGAGGCTGGCATATGTGTTTTGGCCATTTCCGAAGTTGGCCTTTGTTATTTATGGTTTGGAAATAGTATTGAAGAACTTCGAAATGCAAAGCCCACAAAAGTATCATTATCTTTGGAGGACATGTCCACCAAAAATTACAAGGGTGCACTCCCCGCAATATATGCTGCAAAATTGCAAAGCACCCAGAAGCCGGCCTCTGGGCAGGTTTTTCTTGTTTACGGGATGCTTGTAAAACCATCATTTCAAAATATTTTAGTGCATTCCGGTACAGATGTAAAATTGAGTGTCTCCCGTGATGGTGTTCTTCTTCCAACGAGCCAATCTCGTGTAAAATCTAAAAAGAGGACAGATGTACAAAGAGTAACTGCCCTAGACCGTGCAAATGCTGAGGATGCCTTGCTTCCAATTCCTAAAGTTTTTGATTCTCGTGAGAAAGAGGAAGCATTTCAAGACTCTTTAGACAAGGATGCAATGGATGATTTGCTTACAAGTGGTATTATAGCTGATGCTATGGAGATAGATGATGATATTGTGCAAAGTGAGACTAATGTAATTAGCATGGAGGACCGGATGAGATCACTAGGATTGCTTTACAATGAGAGTGACTGTGCGTCCAACTTTGAACTTTGTTCTAAATTGTTGAAGGGTATTGATTTGGAAGCCACTCTTCCAAGGAAAAAGGTAAGAACAGCTGTTTTGTCTATGGAACCAAGCGAAGCATTCAAGCTACTGGAAGTGTTACTGGCTATATGGCAATCAAGGTCGTCTAGCAGAGAGTATGTGCTTCCGTGGATGTATAGCATATTAGTTATTCATGGTCATAATGCTGCTGAAGAATCTGCAACACATATGCTTGATTTGGTATACAAGATTACAAACTCCAGAGGGGCAGCTCTTCAGTCTTTGCTACAATTATCAGGTCGTCTTCAACTGGTGACATCACAGATTGATAAGGCTTCTCAGAAAATAAGCCATTCAGTGCATGATCTCCAAACAGAAGAAAGTAGTGATGAGGATGAATATTATCACGAGGAAGAAGTTGATAAAGAAGATGATGCATCTGAAATAAGTACTGACGATGAAAATTAA 1866 0.4019 MAASADIRGILTAFNPSLDFFAISTGDGRIKIWDALKGQVQTEFADISSTHQTNIFDQKGHLSVDYTCIKWLSFQTKKKRKHSSSLLVLGTGSGDVLALDVSAGQLSWKIDDCHPGGVRAISSLANGSTFYTAGADGMICAIDFTTGNLLEKFKASSKAVSCISVSPDGKKLATAAAQLKIFNCSNKKKIQKCSGHPGSVRSMVFTEDSKYILSSAVGERYVAVWKIDGTKKQSASCVLAMEHPAVFLDSRCIDKGEHDEAGICVLAISEVGLCYLWFGNSIEELRNAKPTKVSLSLEDMSTKNYKGALPAIYAAKLQSTQKPASGQVFLVYGMLVKPSFQNILVHSGTDVKLSVSRDGVLLPTSQSRVKSKKRTDVQRVTALDRANAEDALLPIPKVFDSREKEEAFQDSLDKDAMDDLLTSGIIADAMEIDDDIVQSETNVISMEDRMRSLGLLYNESDCASNFELCSKLLKGIDLEATLPRKKVRTAVLSMEPSEAFKLLEVLLAIWQSRSSSREYVLPWMYSILVIHGHNAAEESATHMLDLVYKITNSRGAALQSLLQLSGRLQLVTSQIDKASQKISHSVHDLQTEESSDEDEYYHEEEVDKEDDASEISTDDEN* 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g4873 621 MobiDBLite consensus disorder prediction 592 621 - -
Mal5g4873 621 Pfam Dip2/Utp12 Family 482 572 IPR007148 -
Mal5g4873 621 Pfam WD domain, G-beta repeat 11 34 IPR001680 GO:0005515
Mal5g4873 621 Gene3D - 10 140 IPR015943 GO:0005515
Mal5g4873 621 Gene3D - 141 272 IPR015943 GO:0005515
Mal5g4873 621 ProSiteProfiles Trp-Asp (WD) repeats profile. 13 43 IPR001680 GO:0005515
Mal5g4873 621 SMART WD40_4 146 183 IPR001680 GO:0005515
Mal5g4873 621 SMART WD40_4 4 34 IPR001680 GO:0005515
Mal5g4873 621 SMART WD40_4 103 143 IPR001680 GO:0005515
Mal5g4873 621 SMART WD40_4 186 226 IPR001680 GO:0005515
Mal5g4873 621 MobiDBLite consensus disorder prediction 581 621 - -
Mal5g4873 621 SUPERFAMILY WD40 repeat-like 13 234 IPR036322 GO:0005515
Mal5g4873 621 PANTHER OS03G0300300 PROTEIN 3 621 - -
Mal5g4873 621 PANTHER OS03G0300300 PROTEIN 3 621 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g4873 Mal-Chr5 121953659 121960716 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g4873 114 227 U-box Gene Family AT2G33340 28.814 2.97e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g4873 K14546 - gmx:100815458 884.404
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g4873 5 121953659 121960716 Mal5g4873 5 121953659 121960716 ECH