Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g4868 ATGGGACAAGAATCAGATTCCAAATCCAAGTTGGTGTTAGAAATTTGCTCCATTTCCACACGTTCTGCATCTTGTGTTCATAGGATTCCAACCAAGACAATTTTCATTGACTGGTATTGCATTCTTGGAGTGGAAGAAAATGCAGGAGTAAATGCCATTCGCAAGAGATACCATAAACTTGCCTTACAACTTCACCCAGATAAGAACAAACATCCAAAAGCAGAAATTGCCTTCAAGCTTGTTTCTGAGGCAAATGCATGTCTAACTAATGCAGCAAAGAGAGAGGCGTTCGACTTCGAGCGGTACAAGCATTTCTGCATTGAGTGCAAAAGAATTCCATATATATCAAGCAATGTTTCTGTCAATTCCAATGGTTCAGGTTTCAAGGCATGGAATATTATCACAAAATCAAGATCTTTTAAGTTTTGGAGAAATATTAAGGATATTAGAGAGAGATTTAATGAGGAGGCTAAGGTGATTGAGAATTGTATGAGAGTAAATTCAATGTCGAGGACAGAATCTCCGCTCTACAATCCGGATAGTTATCTAGATCGGAGCAAGTCAATGCATAGATTTGAGAAAGAAACGCCTGTTTTCAATCCATCAGATTACTTGTACCAAGGCTATCCTCATATGAGGGGCCTTGTTAACAAGAATCCTTCCGCATTTTGGTATTTGCAGTCATCTAGTATGTTGCAGAACGAAAAGAGAGGAGCGCAACATAGCTCGCCTGTTTTTGAGGTCAAATCAAGGAGTATGTTTACAAACCAATTTGCTTTTGTACCATCAAGATAG 795 0.3887 MGQESDSKSKLVLEICSISTRSASCVHRIPTKTIFIDWYCILGVEENAGVNAIRKRYHKLALQLHPDKNKHPKAEIAFKLVSEANACLTNAAKREAFDFERYKHFCIECKRIPYISSNVSVNSNGSGFKAWNIITKSRSFKFWRNIKDIRERFNEEAKVIENCMRVNSMSRTESPLYNPDSYLDRSKSMHRFEKETPVFNPSDYLYQGYPHMRGLVNKNPSAFWYLQSSSMLQNEKRGAQHSSPVFEVKSRSMFTNQFAFVPSR* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g4868 264 PRINTS DnaJ domain signature 39 57 IPR001623 -
Mal5g4868 264 PRINTS DnaJ domain signature 57 72 IPR001623 -
Mal5g4868 264 PRINTS DnaJ domain signature 73 93 IPR001623 -
Mal5g4868 264 SUPERFAMILY Chaperone J-domain 28 101 IPR036869 -
Mal5g4868 264 ProSitePatterns Nt-dnaJ domain signature. 78 97 IPR018253 -
Mal5g4868 264 CDD DnaJ 37 84 IPR001623 -
Mal5g4868 264 PANTHER BNAC03G44070D PROTEIN 4 252 - -
Mal5g4868 264 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 4 252 - -
Mal5g4868 264 SMART dnaj_3 36 93 IPR001623 -
Mal5g4868 264 Pfam DnaJ domain 37 98 IPR001623 -
Mal5g4868 264 Gene3D DnaJ domain 36 161 IPR036869 -
Mal5g4868 264 ProSiteProfiles dnaJ domain profile. 37 101 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g4868 Mal-Chr5 121896721 121897818 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g4868 37 98 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 40.909 1.18e-08 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g4868 - - gmx:100801809 418.698
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g4868 5 121896721 121897818 Mal5g4868 5 121896721 121897818 ECH
Mal5g4868 5 121896721 121897818 Mal4g3704 4 109057482 109059006 PCT