Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g4862 ATGTTTCACTGTCATCGCCTCAGAGCTCTTCTGAATTCCAAAACCCCAAAATGTTGTTACCTTCTTCTAAAACCCCAAGTTTTCAACAACAACTTGTTCTCCACCACCACCACTTCAGATTCAGATCAAAATTCTTTCACCATTTCATACCTCACTCAACATTGCGGTTTGTCTCCAGAGAAGGCTCTCAAAGCATCTAAACGAATTCGTTTCAACACCCCGGAGAAACCCGATTCTGTTATCGCCTTTTTCAAAACCCATGGTTTCTCCAACGACCATATACAATCCATCATTCGCAGGGATCCAGACCTCATCGTTTTCAACCCCATCAAAACCTTTTTGCCAAAGTTTCAATTTTTAGCTTCCAAAGGTGCTTCTCCACAAGACATAGTTGTCACTGCCACTAAAAGCCCTCGTTTTCTTAGTGTAAGCCTTCAGAAACAAATAATCCCTGCTTTTGATTTGGTAAGAAGTTTTTATCCCTCTGATCAAAAAGCTATTACTTCAATAGTTTCTTATCCTGCTTTAATAAGTGATTCTCGCATGATATCAAATATTAATTTTTTGCTTGATTTTGGTGTTACTCGTTCAAGTATTTACCGTTTGCTTAGTAATAGACCTTCTATGATATGTTCTACTGATATGAAAGAGGTTGTCGAGGAGATTAAGGAATTTGGCTTTGATCCTTCCAAATACAATTTTTGTGTCGCATTATTGACCAAAAGGGCTGTCACCAAATCCCAGTGGGATGCTAAAGTTGATGCCTTCAAGAGTTGGGGTTATTCTGAAGATGAAATTTTTAATGCATTTAAAAGACAGCCTAGCTTTATGCTACGGTCTACGGACAAACTCAATGCCGTCATGCGTTTTTGGATCAAACAGCTTGCTTGGGATCCTTTAGTGCTTATGGCGGCACCAGATCTTTTCGGATTTAGTCTAGAGAAAAGGTTCATTCCAAGGGCTTCTGTTGTCCAATATCTTCTTTCCAAAGGTTTGATGAAGAAGAGTGCTAGCTTATACACACCATTTTCTTTGAAGGATGAGTTGTTCCTGAAAAGGTATGTGAATGGTTTTGAGGAGGAGGCATCTAGGCTATTAAGGCTATATCAGGGAGGATGCTAA 1122 0.3939 MFHCHRLRALLNSKTPKCCYLLLKPQVFNNNLFSTTTTSDSDQNSFTISYLTQHCGLSPEKALKASKRIRFNTPEKPDSVIAFFKTHGFSNDHIQSIIRRDPDLIVFNPIKTFLPKFQFLASKGASPQDIVVTATKSPRFLSVSLQKQIIPAFDLVRSFYPSDQKAITSIVSYPALISDSRMISNINFLLDFGVTRSSIYRLLSNRPSMICSTDMKEVVEEIKEFGFDPSKYNFCVALLTKRAVTKSQWDAKVDAFKSWGYSEDEIFNAFKRQPSFMLRSTDKLNAVMRFWIKQLAWDPLVLMAAPDLFGFSLEKRFIPRASVVQYLLSKGLMKKSASLYTPFSLKDELFLKRYVNGFEEEASRLLRLYQGGC* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g4862 373 SMART mt_12 95 126 IPR003690 GO:0003690|GO:0006355
Mal5g4862 373 SMART mt_12 299 333 IPR003690 GO:0003690|GO:0006355
Mal5g4862 373 SMART mt_12 200 228 IPR003690 GO:0003690|GO:0006355
Mal5g4862 373 SMART mt_12 267 298 IPR003690 GO:0003690|GO:0006355
Mal5g4862 373 SMART mt_12 167 195 IPR003690 GO:0003690|GO:0006355
Mal5g4862 373 SMART mt_12 131 162 IPR003690 GO:0003690|GO:0006355
Mal5g4862 373 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 13 371 - -
Mal5g4862 373 PANTHER CGI-12 PROTEIN-RELATED 13 371 IPR003690 GO:0003690|GO:0006355
Mal5g4862 373 Pfam mTERF 247 350 IPR003690 GO:0003690|GO:0006355
Mal5g4862 373 Pfam mTERF 82 228 IPR003690 GO:0003690|GO:0006355
Mal5g4862 373 Gene3D Transcription termination factor 3, mitochondrial 170 367 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g4862 Mal-Chr5 121837613 121838734 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Mal5g4862 mTERF 3.3e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g4862 K15032 - gmx:102666739 352.443