Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g4861 ATGAATTCCAATTATGGCAAACCAAATCCTCAAAAACAATCCTCTGTTTCCCTCAACAACTTCAATTTCGATCTTGATCTTGGAATCGGATCCAATCGATCCAAATCCCTAAAAGATCAGAAAACCCCCAATCCTCCCTCAAATTCCTCCTATTCAACTCCTTCGTATTCATCAACCCAGCCCAAGAAATGGACCCACCAACCCGTTCAAACTCCGGCCGGATTACCCGGTGCACCACCGTCGATGGTCGGTGACATCTTCGGAAAAAGTTGGGGATCAACCCAACCTTCTGGTCCTAGCATTGGAATCGTTAATAAAAATCCTAATTTATTTGGGGATTTGGTTACCTCTGCATTGGGTCAAGGTTCTTCAAATAGTAATAACAACGTTCCTCTGAAAAATTCAACTCCAGCACCTAACAAATCCTCTTTTTCAATGTCAAACATGGCAAATTCTTTGCCTAAACCTGTTAACACGCCACAGAGTGGTTCTAGTTTTGGATCATCTTCTGGGAGTGGTTTTAATTTGAATGCTAATAGAAATCCCAATCTTGGAGGTCCTTCCATTCGAAGTGGTGGAGGTGTTGCTGCATCTGGTAGTGGAATTGGAACTGGAATTAGTTCTGGTAATAAAGATCCTTTTAGTTCATTGGCTGGTTTTGGATCTAAGCCATCTTCTAGTCTTAATTCAGCTGCTAAACCTCTAAAGATTGATTCAGAAGATGATGGTTTTGGAGATTTTCAGAATGCTTCAAAGCCAAGCACTAATGCATTTCCATCAACTGGTGGTAGTGTTGGAATTGATGTTGATTTTACTGGATCTTCCGCTTTTTCGAATCAGACACCTGTTCAAGCTTCTGGGGGTGATCCAATGGATATGTTTTTCACATCTTCTACTGCCTCTTCTGGAGGTGGTGGTGGTGGTGGTGCTGCTGCGGCGGCATCTTCTGAAATTGATGATTGGGGTACTGAGTTTGGAGGAGGAAACCATGATGTGGGCGCTACAACTACTGAGCTTGATGGGCTTCCACCTCCTCCAGCTGGGATATCAGGTTCTGCTGCTAAAGGCAAAGGGATGGATAATTACAAACAGGGACAATTTGCTGATGCTATTAAATGGCTTTCATGGGCTCTTATTCTTCTAGAGAAAGCAGGGGATGGTGCTGGCACGGTCGAGGTTTTGTCGTGCAGAGCTTCTTGTTATAAAGAAGTTGGAGAGTATAAAAAAGCGGTGGCGGATTGTACCAAGGTTATTGGAAACAATGGAAAAAATGTATCTGTCCTGGTCCAGCGTGCGCTCTTGTATGAGAGTATGGAAAAGTACAAACTTGGTGCTGAAGACCTGAGAACTGTGCTGAAGATTGATCCTACTAACAGGGTTGCTAGAAGTACTGTTCACCGGTTGGCTAAGATGGCTGAATAG 1422 0.4346 MNSNYGKPNPQKQSSVSLNNFNFDLDLGIGSNRSKSLKDQKTPNPPSNSSYSTPSYSSTQPKKWTHQPVQTPAGLPGAPPSMVGDIFGKSWGSTQPSGPSIGIVNKNPNLFGDLVTSALGQGSSNSNNNVPLKNSTPAPNKSSFSMSNMANSLPKPVNTPQSGSSFGSSSGSGFNLNANRNPNLGGPSIRSGGGVAASGSGIGTGISSGNKDPFSSLAGFGSKPSSSLNSAAKPLKIDSEDDGFGDFQNASKPSTNAFPSTGGSVGIDVDFTGSSAFSNQTPVQASGGDPMDMFFTSSTASSGGGGGGGAAAAASSEIDDWGTEFGGGNHDVGATTTELDGLPPPPAGISGSAAKGKGMDNYKQGQFADAIKWLSWALILLEKAGDGAGTVEVLSCRASCYKEVGEYKKAVADCTKVIGNNGKNVSVLVQRALLYESMEKYKLGAEDLRTVLKIDPTNRVARSTVHRLAKMAE* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g4861 473 Gene3D Tetratricopeptide repeat domain 351 472 IPR011990 GO:0005515
Mal5g4861 473 MobiDBLite consensus disorder prediction 1 67 - -
Mal5g4861 473 ProSiteProfiles TPR repeat profile. 425 458 IPR019734 GO:0005515
Mal5g4861 473 MobiDBLite consensus disorder prediction 122 196 - -
Mal5g4861 473 MobiDBLite consensus disorder prediction 122 186 - -
Mal5g4861 473 MobiDBLite consensus disorder prediction 248 262 - -
Mal5g4861 473 PANTHER OS03G0340700 PROTEIN 1 473 - -
Mal5g4861 473 MobiDBLite consensus disorder prediction 1 102 - -
Mal5g4861 473 SMART tpr_5 351 384 IPR019734 GO:0005515
Mal5g4861 473 SMART tpr_5 425 458 IPR019734 GO:0005515
Mal5g4861 473 SMART tpr_5 391 424 IPR019734 GO:0005515
Mal5g4861 473 MobiDBLite consensus disorder prediction 236 262 - -
Mal5g4861 473 SUPERFAMILY TPR-like 353 463 IPR011990 GO:0005515
Mal5g4861 473 MobiDBLite consensus disorder prediction 88 102 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g4861 366 473 Calmodulin-binding Proteins AT3G25230 30.357 5.34e-08 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g4861 - - vun:114178472 578.941
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g4861 5 121831403 121834113 Mal5g4861 5 121831403 121834113 ECH